Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte12g00797 ATGTCAACCCAAGCTATAAATTCTGTACTTAAGTTGGAAGAGATACAGGGCAGAGGGAGGGGGCTGGTAGCTTCTCAGCCTCTTAAAGCTGGTCAAGTCATCCTCAAAGATTCACCGATTCTTTTGTATTCTGCTTTTCCTTTGGTCACAGAGTCCAAGGCCTCATCTACATCCTACTGTGCCAAGTGCTTCAGAAGCCTCCATCCATCATTGCCTAATTACTCATGTTCTTCATGTTCTCATATTTTTTGTAGTCCAAAGTGCCTGTCTAATGCGCTCAACACATCTCACTCCCCTTGGGTATGTCAAACTTTATCTAGCCTGCTGAGTTCTACTCCGGCGATACTCCAACAACCTCCTGAACTTCAAGTCCAAGTTCGTTTCCTTGTGTCTGCATATAACCTTGCTTTGACATCATCCACAGATTTTCAGATGTTGCTTTCCCTCCATGGTTCTCCTGATGCTACCACAATTGCTTCAGCTCAGCTACTGCATTCCCTCCTCTCCTGTCTCTGCCCTCTTCATCCAGTTTTTGCTCAGATTGGGTTTTCAGTGGAACTTAGTGCTTCTCTGCTGGCTAAGGACAAGCATAGTGCCTTTGGCTTAATGCAGCCATTCTCTGAAAATGATGCCCAGAGATCTGTTAGAGCATATGGAATTTACCCTAATGCTTCTTTTTTCAACCATGACTGCCTTCCTAATGCCTGCAGATTTGACTATCTAGATTCTGGTTCACTTGATGATGAACACAACACAGACATTATTATTCGGATGATTCATGATGTTCCCCAGGGAAGAGAGATCTGTTTGAGCTATTTCCCTGTGAATGAGAATTATGCCAGCAGGCAAAAAAGATTGATGGAAGACTATGCCTTAGCCTGTAACTGTGATAGGTGCAATGTGGAATCCAACTGGTCGGATAAGGAGGACATTGGAGATGCTAATGATGATGAAGAGGAGTTGATGGATGAGGACCAATGTGAAGATATGTCAGCTTCAGATAATGGTACTGCCGAAGGAGATAATGATTTCCCACATGCCTATTTCTTCTTGCGGTACATGTGTGATCGAAACAACTGTTGGGGAACTTTGGCTCCCTTGCCTCCATCAGATAATACTCCATCTAATGTCCTGGAATGTAATGTCTGTGGCAAGCTGACTAGAGATGATGGATTTGATGCTGATGGTGGCAAAGATGGTCTTTCCATGGAAGGCTAA 1218 0.4392 MSTQAINSVLKLEEIQGRGRGLVASQPLKAGQVILKDSPILLYSAFPLVTESKASSTSYCAKCFRSLHPSLPNYSCSSCSHIFCSPKCLSNALNTSHSPWVCQTLSSLLSSTPAILQQPPELQVQVRFLVSAYNLALTSSTDFQMLLSLHGSPDATTIASAQLLHSLLSCLCPLHPVFAQIGFSVELSASLLAKDKHSAFGLMQPFSENDAQRSVRAYGIYPNASFFNHDCLPNACRFDYLDSGSLDDEHNTDIIIRMIHDVPQGREICLSYFPVNENYASRQKRLMEDYALACNCDRCNVESNWSDKEDIGDANDDEEELMDEDQCEDMSASDNGTAEGDNDFPHAYFFLRYMCDRNNCWGTLAPLPPSDNTPSNVLECNVCGKLTRDDGFDADGGKDGLSMEG* 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte12g00797 405 Gene3D - 117 205 - -
Pte12g00797 405 SMART set_7 7 279 IPR001214 GO:0005515
Pte12g00797 405 MobiDBLite consensus disorder prediction 311 330 - -
Pte12g00797 405 CDD SET_SMYD 208 299 - -
Pte12g00797 405 Gene3D SET domain 21 299 IPR046341 -
Pte12g00797 405 Gene3D - 59 111 - -
Pte12g00797 405 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE ASHR2 1 395 IPR044238 -
Pte12g00797 405 Pfam SET domain 19 272 IPR001214 GO:0005515
Pte12g00797 405 SUPERFAMILY SET domain 12 300 IPR046341 -
Pte12g00797 405 MobiDBLite consensus disorder prediction 307 339 - -
Pte12g00797 405 SUPERFAMILY FYVE/PHD zinc finger 55 103 IPR011011 -
Pte12g00797 405 ProSiteProfiles SET domain profile. 8 273 IPR001214 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte12g00797 Pte-Chr12 9143630 9144847 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Pte12g00797 SET 1.6e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte12g00797 - - gmx:100783406 545.428