Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte12g00792 ATGGGTAGCTGTGGAAGAGAAGGAGCTGTGAGACAGTATATAAGATCCAAGGTTCCTCGTCTGAGATGGACACCTGAGCTTCATCGTTGTTTTGTTCATGCGATTGAGAGTCTCGGTGGTCATCACAAAGCAACACCTAAGCTTGTTCTTCAATTGATGGATGTGAAAGGACTTACAATTTCACATGTGAAGAGCCATCTTCAGATGTATAGAAGTATGAAAGGTGAGTTGGGCAGACAAGATAGGAGTTCTATCCAACATAGAAAATCTTTTGAGGAACATGATGATGGATGTATTGATGAAGTGAATGATTTTGTGGGGTTTCACACTTCTTCAATATCTATGGGAAAAGAATCAGATTCTCCTTCTAGCTACAGTCATTGCCACACAAAAAGATCTAGAATCGAGAAGACTAGATCATTTTTTGGCAGCCAAAGAATATGTGAGACTGTTCAAAGTCCGTACTCTTTTCATCATTTTCTGCAAGCAATGGCTGAGCACAAGGGAATCAACGTGAGCTGTGGTGGTTCAAGATGGCAGAGCCAGCTCCCTACTACCACATCCTTTCCTTTGCTACCAGATTTCTCCAACCTAAAACCTTTGAATTATCCAAAGAAAAATACTGTTATCCTTCAGGTGTCTGAATTGGATAATTATCTGAAGCCTCAATCAGAAGAAAAAAACGATGAAGTTGAGAAACACAGTGTGAGGGTACATGCAGAAGAAGAAGATTATGGAGTTGGGGGGTGTGAGTTGTCATTGTCACTTTCATTACCAAAGCCTTGCTCTCTGAGAAGTAATAACAATTCTTCAGTGAGTGAGATCAGTGAGGCATTTTCATCATCATATTCTAAGTCCAATTACAAAGACTGTTCAAGTACTTCCAATGGCAAAAATAGTGTCAACTTAAACCTATCTATTGCCCTATGTGGCAACTGA 939 0.4004 MGSCGREGAVRQYIRSKVPRLRWTPELHRCFVHAIESLGGHHKATPKLVLQLMDVKGLTISHVKSHLQMYRSMKGELGRQDRSSIQHRKSFEEHDDGCIDEVNDFVGFHTSSISMGKESDSPSSYSHCHTKRSRIEKTRSFFGSQRICETVQSPYSFHHFLQAMAEHKGINVSCGGSRWQSQLPTTTSFPLLPDFSNLKPLNYPKKNTVILQVSELDNYLKPQSEEKNDEVEKHSVRVHAEEEDYGVGGCELSLSLSLPKPCSLRSNNNSSVSEISEAFSSSYSKSNYKDCSSTSNGKNSVNLNLSIALCGN* 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte12g00792 312 NCBIfam myb-like DNA-binding domain, SHAQKYF class 19 73 IPR006447 GO:0003677
Pte12g00792 312 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 7 117 IPR046955 GO:0003700
Pte12g00792 312 FunFam Myb family transcription factor 17 75 - -
Pte12g00792 312 Gene3D - 18 74 - -
Pte12g00792 312 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 15 75 IPR017930 -
Pte12g00792 312 SUPERFAMILY Homeodomain-like 17 73 IPR009057 -
Pte12g00792 312 Pfam Myb-like DNA-binding domain 21 71 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte12g00792 Pte-Chr12 9090109 9093605 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte12g00792 1 163 G2-like Transcription Factor Family AT1G14600 43.258 4.82e-35 126
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Pte12g00792 Myb_DNA-binding 3.9e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte12g00792 - - qsa:O6P43_032368 342.813