Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte12g00786 ATGGACCATGATGAGACTGGTTGCCAAGCCCCCCCAGAGGCTCCTGTCCTCTGCATTAACAACTGTGGCTTTTTCGGGAGTCAAGCTACCATGAACATGTGTTCCAAGTGCCATAAAGACTTGATTCTGAAACAGGACCAAGCCAAATTTGCTGCATCTTCTATCGAGAACATTGTTAATGGATCATCAAGTAACATTGGGAAAGAACCAATTCTTACTGCTAATGTAGATGTTGCAACCAATTCTGTAGCACCTAAAATTATATCCGTGCATCCATCATTTGCTTCAACAACGGAGGACAGTGCTGAGGAGAAGCTAAAAGAGGGTCCAAAACGCTGCACCAGTTGCAATAAGCGGGTTGGTTTAACTGGGTTCAGTTGTCGATGTGGGAACCTTTTCTGTGCTGTACACCGGTATTCAGAAAAGCACAACTGCCCATTTGACTACCGCACTGCTGGAAGGGATGCAATAGCCAAAGCTAATCCTGTTGTCAAGGCTGAGAAGCTTGATAAGATCTAG 519 0.4509 MDHDETGCQAPPEAPVLCINNCGFFGSQATMNMCSKCHKDLILKQDQAKFAASSIENIVNGSSSNIGKEPILTANVDVATNSVAPKIISVHPSFASTTEDSAEEKLKEGPKRCTSCNKRVGLTGFSCRCGNLFCAVHRYSEKHNCPFDYRTAGRDAIAKANPVVKAEKLDKI* 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte12g00786 172 Gene3D - 3 65 - -
Pte12g00786 172 PANTHER AN1-TYPE ZINC FINGER PROTEIN 13 172 - -
Pte12g00786 172 ProSiteProfiles Zinc finger AN1-type profile. 107 153 IPR000058 GO:0008270
Pte12g00786 172 ProSiteProfiles Zinc finger A20-type profile. 12 46 IPR002653 GO:0003677|GO:0008270
Pte12g00786 172 Gene3D - 89 168 IPR035896 -
Pte12g00786 172 SMART AN1_Zf_4 113 150 IPR000058 GO:0008270
Pte12g00786 172 SMART A20_3 15 39 IPR002653 GO:0003677|GO:0008270
Pte12g00786 172 Pfam AN1-like Zinc finger 113 149 IPR000058 GO:0008270
Pte12g00786 172 FunFam Zinc finger AN1-type containing 6 89 168 - -
Pte12g00786 172 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 17 54 - -
Pte12g00786 172 SUPERFAMILY AN1-like Zinc finger 97 167 IPR035896 -
Pte12g00786 172 Pfam A20-like zinc finger 17 39 IPR002653 GO:0003677|GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte12g00786 Pte-Chr12 8940809 8943854 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte12g00786 4 173 C2H2 Transcription Factor Family AT3G52800 45.614 2.36e-41 135
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte12g00786 - - gmx:100500070 286.189