Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte12g00784 ATGGCTTCACCTTCCACATCTCTTTCATTCACAGTTCGGAGGCAGAAACCAGAGCTAGTAGCACCGGCGGCACCTACCCCGCACGAGCTTAAACAACTGTCTGACATTGATGACCAAGAATGTCTACGTTTCCAACTCCCAGGGTTGCAGTTTTATCGTAACGACCCTTCCATGCAAGGGAAAGATCCGGTTGAAGTCATTAGGAAAGCACTGTCAAAAGCTTTGGTTTTCTACTACCCTTTTGCTGGTAGGCTTAGGGAAGGAGCAAATAAGAAGCTCATGGTGGATTGCACCGGTGAAGGTGTGCTGTTCATTGAGGCTGATGCTGATGTTAGCCTTGAACAATTTGGCGATCCTCTTCAACCGCCATTTCCACTGTTGGAAGAGCGACTCTATTATGTTCCAGGATCGGGTGAGCTTCTTCATTGTCCTTTGCTGCTAATACAGGTGACTCGTCTCAAATGTGGTGGTTTCATTTTGGCCATTCGTATAAACCACACAATGACTGATGGAACAGGCGCATCACAATTCATGTGTGCAATAGGAGAAATTGCTAGAGGTGCTGAGATACCTTCCATTCAGCCAGTATGGTGCAGAGAGCTATTGAATGCAAGAATTCCACCTCGTGTCACATACAAACACCGTGAATATGAAGAAGTTGTTGTAACTAAAGACATAATCATCCCGCGTGATCAAATCCATCGTTCTTTCTTTTTCGGTCCTTCAGAGATATCAACCATTAAAGAGTACATTCCAAGTCACTTGGGCAAATGCTCAACCTTTGAGATACTCTCAGCTTCCTTATGGCGATGCCGCACTATTGCATTGCACCTAGACCCTGAGGAACAGGTGCGTCTAGTATGCATTGTAAATGCTAGAGGAAAATTCAATCCTCCATTGCCAATAGGCTATTATGGCAATGGATTAGCATTCTCTATGGCATTGACAACAGCAAAGGAACTTACTGAAAAACCATTACAGTATGCAATTGGGTTGGTGAAGAAGGCCAAAGATGATGTGACCGAAGAATACATGAGATCTGTAGCTGATCTTATGGTTATCAAAGGAAGACCTCATTTCACCGTGGCGGGATCTTACGTTGTATCTGATGTAACACGTGTTGGATTGGTTGATGTTGATTTTGGATGGGGCAAGCCTTCATATGCTGGACCAGCTACAGGTAGTGTCGGTGTCGTTCCTGGAGGGGGTAGCTTTTTCATATCATCCAAAAATGACAAAGGAGAGAAAGGTATTTTGGTTTCTGTATGCCTACCAGCCTTGGCCATGAAACGTTTTGTTGTAGAAATGGACAAATTATTGAGAGGTCCAAGCCATCCTGACGTTGGGATCTATCATTATGTTTAA 1365 0.4418 MASPSTSLSFTVRRQKPELVAPAAPTPHELKQLSDIDDQECLRFQLPGLQFYRNDPSMQGKDPVEVIRKALSKALVFYYPFAGRLREGANKKLMVDCTGEGVLFIEADADVSLEQFGDPLQPPFPLLEERLYYVPGSGELLHCPLLLIQVTRLKCGGFILAIRINHTMTDGTGASQFMCAIGEIARGAEIPSIQPVWCRELLNARIPPRVTYKHREYEEVVVTKDIIIPRDQIHRSFFFGPSEISTIKEYIPSHLGKCSTFEILSASLWRCRTIALHLDPEEQVRLVCIVNARGKFNPPLPIGYYGNGLAFSMALTTAKELTEKPLQYAIGLVKKAKDDVTEEYMRSVADLMVIKGRPHFTVAGSYVVSDVTRVGLVDVDFGWGKPSYAGPATGSVGVVPGGGSFFISSKNDKGEKGILVSVCLPALAMKRFVVEMDKLLRGPSHPDVGIYHYV* 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte12g00784 454 Gene3D - 7 219 IPR023213 -
Pte12g00784 454 PANTHER ACYL TRANSFERASE 4 10 439 - -
Pte12g00784 454 Pfam Transferase family 12 437 - -
Pte12g00784 454 Gene3D - 226 434 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte12g00784 Pte-Chr12 8885019 8911457 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte12g00784 19 432 Monolignol Biosynthesis Gene Families AT5G48930 30.575 1.53e-53 183
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte12g00784 K19861 - qsa:O6P43_030206 640.573