Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte12g00780 ATGGATCTTTTGGACCAGCTTCAGTTGAAAGGAGTCCACCATTCTGATTTCAATGGTGGATGTAAAATTGGGAGAGTGAAGGTGAATACCGTGCTTGGTTCTGCAGCACCACCTTTAACAGTGAAACTTGTGAAAGCTTTCAGTCCTACTTCAAAGGATGCTGCTGTTGTGGAGGGCAAGGAGCTAAGTTTGACCGACAAACTGGAGTGCATTCCTTTGGTGTTTTGCCAGAGTGTGGATGTAGGAAATTATGTGTTTGTCTTGGAGATGCAGGTCTTTGCTTCACTTCAACGACATAAGCAACATTTGTTCACTCTCTTGAGAAGATATCCGTCCATGGCTGTCAACTTTCGTTTGTTCTCCTCTATTTTCGCTCTCATGCTGCTACTGGCAGCCACTGAGATGGGGCCAATGGTGGCAGAAGCAAGAACATGTGAATCAGCGAGCCACAGGTTCAACGGACCGTGTTTAAGGGATAGCAACTGCGCTTCTGTGTGCCAATCTGAAGGTTTTCCTGGTGGCGATTGCCGTGGATTCCGCCGCAGATGTTTCTGTGTAGGACCTTGTTAG 570 0.4702 MDLLDQLQLKGVHHSDFNGGCKIGRVKVNTVLGSAAPPLTVKLVKAFSPTSKDAAVVEGKELSLTDKLECIPLVFCQSVDVGNYVFVLEMQVFASLQRHKQHLFTLLRRYPSMAVNFRLFSSIFALMLLLAATEMGPMVAEARTCESASHRFNGPCLRDSNCASVCQSEGFPGGDCRGFRRRCFCVGPC* 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte12g00780 189 PRINTS Purothionin signature 144 159 IPR008176 GO:0006952
Pte12g00780 189 PRINTS Purothionin signature 174 188 IPR008176 GO:0006952
Pte12g00780 189 Pfam Gamma-thionin family 143 189 - -
Pte12g00780 189 SUPERFAMILY Scorpion toxin-like 143 189 IPR036574 -
Pte12g00780 189 CDD Knot1 154 185 IPR003614 GO:0006952
Pte12g00780 189 ProSitePatterns Gamma-thionins family signature. 143 166 IPR008176 GO:0006952
Pte12g00780 189 PANTHER DEFENSIN-LIKE PROTEIN 1 114 185 - -
Pte12g00780 189 Pfam Oligosaccharyltransferase subunit Ribophorin II 25 105 IPR008814 GO:0006487|GO:0008250|GO:0016020
Pte12g00780 189 SMART gth_4 144 189 IPR003614 GO:0006952
Pte12g00780 189 Gene3D - 143 189 IPR036574 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte12g00780 Pte-Chr12 8835133 8839656 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte12g00780 113 190 Plant Defensins Gene Families AT2G02100 57.692 3.97e-29 101
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte12g00780 - - qsu:112014184 91.2781