Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte12g00779 ATGGCTGTCAACTTTCGTTTGTTCTCCTCTGTTTTCGTTCTCATGCTGCTACTGGCAGCCACTGAGATGGGGCCAATGGTGGCAGAAGCAAGAACATGTGAATCAGCGAGCCACAGGTTCAAGGGACCGTGTGTAAGGGATAGCAACTGCGCTTCTGTGTGCCACACTGAAGGTTTTCCTGGTGGCGATTGCCGTGGATTCCGCCGCAGATGTTTCTGTGTAAAACCTTGTTAG 234 0.5128 MAVNFRLFSSVFVLMLLLAATEMGPMVAEARTCESASHRFKGPCVRDSNCASVCHTEGFPGGDCRGFRRRCFCVKPC* 78
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte12g00779 77 SMART gth_4 32 77 IPR003614 GO:0006952
Pte12g00779 77 Gene3D - 31 77 IPR036574 -
Pte12g00779 77 PRINTS Purothionin signature 62 76 IPR008176 GO:0006952
Pte12g00779 77 PRINTS Purothionin signature 32 47 IPR008176 GO:0006952
Pte12g00779 77 SUPERFAMILY Scorpion toxin-like 31 77 IPR036574 -
Pte12g00779 77 PANTHER DEFENSIN-LIKE PROTEIN 1 3 74 - -
Pte12g00779 77 ProSitePatterns Gamma-thionins family signature. 31 54 IPR008176 GO:0006952
Pte12g00779 77 CDD Knot1 42 73 IPR003614 GO:0006952
Pte12g00779 77 Pfam Gamma-thionin family 31 77 - -
Pte12g00779 77 FunFam Defensin-like protein CAL1 31 77 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte12g00779 Pte-Chr12 8831065 8831392 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte12g00779 1 78 Plant Defensins Gene Families AT2G02100 62.821 1.43e-33 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte12g00779 - - qsu:112014184 118.242