Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte12g00777 ATGGCCTCACCATCCAAATCTTTTTCATTCGCAGTTCGGAGGCAGAAACTGGAGTTAGTAGCTCCGGCTATTCCTACTCCACGAGAGCTTAAACAACTATCTGACATTGATGACCAAGAAGGTCTGCGTTTCCAAATCCCAGGGATACAGTTTTACCGTAATAATCCTTGCATGCAAGGGAAAGACCCTGCAGATTCTATTAGGAAAGCACTGTCAAAAGCTTTGGTTTTCTACTACCCTTTTGCTGGTAGGCTTAGGGAAGGAGCAAATAAGAAGCTCATGGTGGATTGCACAGGTGAAGGTGTGCTGTTCATTGAGGCTGATGCTGATGTTAGCCTTGAACAATTTGGTGATGCTCTTCAACCTCCATTTCCTCTTTTGGAAGAGCTACTCTTCGATGTTCCTGGCTCTGGTGAGGTTCTTCACTGTCCTCTGTTGCTAATACAGGTGACTCGTCTCAAATGTGGTGGGTTCATCTTTGCCATTCGTGTAAACCATGCAGTAACTGATGCAGTAGGCACAGTTCAATTCATGTACGCAATAGGAGAAATCGCAAGAGGTGCTGAGATACCATCCATTCAACCAGTATGGTGTAGAGAGCTATTGAATGCAAGATTTCCACCTCGTGTCACATGCATACACCACGAATACGATAGAGTTGCTGACACGAAAGGCACCATTATACCACTTGATCAAATGGTTCATTGTTCTTTCTTCTTCGGTCCTACTGAGATATCAGCCATTAGAAAATCCATTCCCAATCACTTAGCCAAATGTTCGACCTTTGAATTACTCTCTGCTTCCTTATGGCGATGTCGCACCATAGCATTGCAGCCAGACCCTGAGGAACAAGTGCGTATGATATGCATTGTTAATGCTAGATCGAAGTTTAATCCTCCACTGCCAGCAGGCTATTATGGCAATGGATTTGCATTTCCAGTTGCATTGTCGACGGCGAAGGAACTAAGTGAAAAACCATTAGGGTATGCACTTGAGTTAGTAAAGAAGGCAAAGGCTGATGTGACTGAAGAATACATGAGATCAACAGCTGATCTTATGGTGATGAAAGGAAGACCTCACTTCACAGTAGTGAGAACTTACCTTGTATCTGATGTAACTCGTGCTGGATTCATTGATGTTGATTTTGGATGGGGTAAAGCAGCATATGGTGGACCAGCTAAAGGTGGTGTTGGTGCCATTCCTGGAGTGGCTAGCTTTTTCATATCATTCAAGAATGGCAAGGGAGAGAATGGTATTGTGGTGCCTATTTGTCTACCGGCCTTTGCCATGGAAAGGTTTGTTGTGGAAATGGACAAATTATTGAAAGGTGCAAGTCATCCTCATATTGGGGTTCCATCTTCCAGTTTTATCACTTCCAGCTTGTAG 1386 0.4387 MASPSKSFSFAVRRQKLELVAPAIPTPRELKQLSDIDDQEGLRFQIPGIQFYRNNPCMQGKDPADSIRKALSKALVFYYPFAGRLREGANKKLMVDCTGEGVLFIEADADVSLEQFGDALQPPFPLLEELLFDVPGSGEVLHCPLLLIQVTRLKCGGFIFAIRVNHAVTDAVGTVQFMYAIGEIARGAEIPSIQPVWCRELLNARFPPRVTCIHHEYDRVADTKGTIIPLDQMVHCSFFFGPTEISAIRKSIPNHLAKCSTFELLSASLWRCRTIALQPDPEEQVRMICIVNARSKFNPPLPAGYYGNGFAFPVALSTAKELSEKPLGYALELVKKAKADVTEEYMRSTADLMVMKGRPHFTVVRTYLVSDVTRAGFIDVDFGWGKAAYGGPAKGGVGAIPGVASFFISFKNGKGENGIVVPICLPAFAMERFVVEMDKLLKGASHPHIGVPSSSFITSSL* 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte12g00777 461 Gene3D - 221 435 IPR023213 -
Pte12g00777 461 Pfam Transferase family 13 438 - -
Pte12g00777 461 PANTHER ACYL TRANSFERASE 4 10 440 - -
Pte12g00777 461 Gene3D - 11 219 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte12g00777 Pte-Chr12 8774425 8775971 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte12g00777 19 437 Monolignol Biosynthesis Gene Families AT5G48930 30.227 1.68e-47 167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte12g00777 K19861 - qsa:O6P43_030206 686.026