Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte12g00758 ATGGAATTGAGAAGCCATACCATTGCGACCAGATGCATTAGAGCTGCCAGAATTACTAGGCCGAACTATGTGATCTCTCAATATTCAGACTCTGACAGTGATAATAGCATTGACTCAAGGGAAACCGATCCTGATTTTAATCGGCAGCCATCAATAAGACGCCAAAGAGAGTACCTTCGATTTGAAGAGAAAAAACCTCTAATTAGAATCGAAAAACCTAAAAGGGGTCGCCCTCCTAAATCTAGATCAGAGACAGGTAGCTCTAGTCATGGAGGCAATGATGATCCTTCGCCGCATCAAATTAGAAGTGGTAACAAATCAAGGAAAGCTGTAGATAAAACGGCTGAAAATGAGAAAAGGTTTCCAAATTGGCGAAGAAATCAAAAGATGGTTCAGGAAAACTCACCCGTGAGACCTCAGAGAGATGAAGAAATTCTGGAAAAACACAATCAAAATAGAGTGGTTGCAGTTGGCACGGGTTTGTTTCAGTCCTCGGATCAGCTCACAGCCCTTGCCAATACAATCGACAAATCCAATGATACCTGCGTGTTTTGCGGAGGTGGAGGTGTCCTAATTTGCTGTGGTAATTGCCCTTCAACATTTCACCCAGGGTGTATGCATTTGGAGGGAATTCCTCAAGGTGACTGGCGGTGCCCTTACTGTGTTTGCAAATACTGTAAAGCTAATGAGGATAAGGGGTGTTTGAAAACATGTGCCATTGCTGAGAAGTTGAAAAGCTTGGTTGGAAAGAATCATGAGTTTAGTGGAGGGTTGTCATGGATTTTGTTGAAGAGAATGGAATTTAGTATTAATGAACCAGAGGAGGAGTCTGAATTATGCAATAAGATTGTAACAAACACAAAAATTGCACTTGCCTCGGAGTTATTGAAAGATTCATTCAAGATTATGAAATACCGGTCCACTTGGATTGACTTGCTTCCAAAAATTGTATTTAGTTGCAGCTCCAAGTTTAGTCGGACAAATTATGGAGGTTTCTACACTTTTATGCTTCAAAAGGAGGACAAACTTCTCTGTGCAGCAACAGTGAGAATTCATGGAGCAGAACTTGCAGAAATGCCATTTGCAAGCTCCGGGAAAAAATTTAGGAACCAAGGGATGTTACACAGATTAATGTCCATCATTGAATCTACATTATGCGATTTGAAGATTAGATCATGGGTTATTCTATCTGTGGATGACCTGGTTGATATGTGGACTGGTGGATATGGATTCTCAGCGATAAGCGGTGAAATGAGCAAAAAACTTACTTCTTACAACACATTAATGTTTCCTGGGACAGTCAGACTTCACAAGTTCTTGATGTCGAATGCAGATGAGTGGTGA 1344 0.41 MELRSHTIATRCIRAARITRPNYVISQYSDSDSDNSIDSRETDPDFNRQPSIRRQREYLRFEEKKPLIRIEKPKRGRPPKSRSETGSSSHGGNDDPSPHQIRSGNKSRKAVDKTAENEKRFPNWRRNQKMVQENSPVRPQRDEEILEKHNQNRVVAVGTGLFQSSDQLTALANTIDKSNDTCVFCGGGGVLICCGNCPSTFHPGCMHLEGIPQGDWRCPYCVCKYCKANEDKGCLKTCAIAEKLKSLVGKNHEFSGGLSWILLKRMEFSINEPEEESELCNKIVTNTKIALASELLKDSFKIMKYRSTWIDLLPKIVFSCSSKFSRTNYGGFYTFMLQKEDKLLCAATVRIHGAELAEMPFASSGKKFRNQGMLHRLMSIIESTLCDLKIRSWVILSVDDLVDMWTGGYGFSAISGEMSKKLTSYNTLMFPGTVRLHKFLMSNADEW* 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte12g00758 447 PANTHER PHD FINGER PROTEIN 12 167 238 IPR042163 GO:0003714|GO:0045892
Pte12g00758 447 MobiDBLite consensus disorder prediction 26 119 - -
Pte12g00758 447 MobiDBLite consensus disorder prediction 82 100 - -
Pte12g00758 447 SUPERFAMILY FYVE/PHD zinc finger 172 224 IPR011011 -
Pte12g00758 447 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 171 255 IPR013083 -
Pte12g00758 447 MobiDBLite consensus disorder prediction 34 81 - -
Pte12g00758 447 ProSitePatterns Zinc finger PHD-type signature. 182 221 IPR019786 -
Pte12g00758 447 ProSiteProfiles Zinc finger PHD-type profile. 179 224 IPR019787 -
Pte12g00758 447 SMART PHD_3 181 222 IPR001965 -
Pte12g00758 447 MobiDBLite consensus disorder prediction 101 119 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte12g00758 Pte-Chr12 8122236 8124355 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte12g00758 181 441 PHD Transcription Factor Family AT1G05380 34.106 4.62e-58 204
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte12g00758 - - zju:107434987 238.039