Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte12g00735 GATCCAGAGGTACGGTTGGGTCATTTAAAAAGGTATACTTTTAAGGAGCTCCGTGCTGCAACCGAACATTTCCACTCAAGGAATATTCTTGGTAAAGGTGGATATGGAATAGTTTACAAAGGACGTCTAAGTGATGGATCTGTTATAGCCATTAAAAGATTAAAGGACTATAATGCAGCTGGTGGTGAAATCCAATTTCAGACAGAAGTTGAGTTGATAAGTATGGCTGTTCACCGCAATCTCCTTAAGCTCTATGGGTTTTGCTCAACTGAGACTGAGAGACTCCTTGTATATCCCTATATGCCCAATGGAAGCGTGGCATCAAGGCTAAGAGATCATATTCATGGTCGACCAGCTTTAGACTGGGCAAGACGAAAGAGAATAGCATTAGGCACGGCAAGGGGTTTGGTATATTTGCATGAACAATGTGATCCCAAAATCATCCACCGTGATGTCAAAGCTGCCAACATCTTGCTGGATGAAGACTTTGAGGCAGTTGTTGGTGATTTTGGTTTGGCAAAGCTTTTGGATCACAGAGATTCCCATGTGACAACAGCTGTCCGAGGCACTGTTGGGCATATAGCTCCTGAATACTTGTGTACGGGTCAGTCATCAGAAAAGACTGATGTCTTTGGGTTTGGAATATTGCTCCTTGAGCTCATCACAGGTCAGAAAGCTCTCGACTTTGGAAGAGCAGCACATCAGAAAGGTGTAATGCTTGATTGGGTGAAAAAAATCCATCAGGATGGGAAACTAAATCTACTAGTTGATAAGGATTTGAAGGGAAATTATGATCGGAATGAGTTGGAAGAAATGGTTCAAGTTGCACTCTTGTGTACACGGTTTAGTCCTTCTGATCGTCCCAGAATGTCAGAAGCACTGAAGATGTTAGAAGGAGATGGCTTAGCTGAAAGATGGGAGGCCTCTCAGAAAGTAGAGACTTCAAGGAACAGG 954 0.4308 DPEVRLGHLKRYTFKELRAATEHFHSRNILGKGGYGIVYKGRLSDGSVIAIKRLKDYNAAGGEIQFQTEVELISMAVHRNLLKLYGFCSTETERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLVYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLCTGQSSEKTDVFGFGILLLELITGQKALDFGRAAHQKGVMLDWVKKIHQDGKLNLLVDKDLKGNYDRNELEEMVQVALLCTRFSPSDRPRMSEALKMLEGDGLAERWEASQKVETSRNR 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte12g00735 318 ProSiteProfiles Protein kinase domain profile. 24 307 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte12g00735 318 PIRSF ILK 9 312 - -
Pte12g00735 318 Gene3D Phosphorylase Kinase; domain 1 1 100 - -
Pte12g00735 318 FunFam Somatic embryogenesis receptor-like kinase 1 101 317 - -
Pte12g00735 318 ProSitePatterns Protein kinases ATP-binding region signature. 30 52 IPR017441 GO:0005524
Pte12g00735 318 ProSitePatterns Serine/Threonine protein kinases active-site signature. 147 159 IPR008271 GO:0004672|GO:0006468
Pte12g00735 318 SUPERFAMILY Protein kinase-like (PK-like) 9 299 IPR011009 -
Pte12g00735 318 Pfam Protein kinase domain 25 295 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte12g00735 318 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 6 308 - -
Pte12g00735 318 SMART serkin_6 24 297 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte12g00735 318 FunFam Somatic embryogenesis receptor kinase 1 1 100 - -
Pte12g00735 318 Gene3D Transferase(Phosphotransferase) domain 1 101 317 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte12g00735 Pte-Chr12 7603364 7605372 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte12g00735 1 311 Receptor kinase-like Gene Family AT1G60800 83.280 0.0 554
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Pte12g00735 Pkinase 1e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte12g00735 - - qsa:O6P43_025271 580.867