Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte12g00729 ATGAAAATCACCACCATCACCATCGTCGTTGTGTCAACAGCGTCATTATTTGCAATAGCCATATTCATCATCGTCTTTCTCAAGAGAAAGAGAGCACACACAAATAGCGTAGAAGCTCCAAAAACATCTAAAACTGCAAAGGCCAAGAAATTTTCTTCCAGTAACAGTGTCCTGTCTAAGGAGGCCTTGGAAGAAATGGCAGGATTTGAATCTGAGAGACCAGTTACATACAGTGTCCAGGAGATCGAAGAGGCTACAAATAATTTTGATGAAACTAGGATACTTGGCAGAGGTGGGTACGGGAATGTCTATTATGGAAAGTTAGGAAAACAGGAGGTTGCAGTGAAGAAAATGATATCTAATAAATCCAAAGAATTCTACGCAGAGCTCAAGGTCTTATGCAAGATCCATCACATAAATGTTGTGGAGTTACTGGGGTTTGCCAGTGGAGAAGACCATTTCTATTTAGTGTATGAGTATGTTCAAAGTGGATCTCTCAGTGATCATCTTCACGATCCATATCTAAAAGGTCATGAGCCTCTATCTTGGTCTACTAGAATACAGATTGCTCTAGATGCAGCAAAGGGAATTGAGTACATACATGACCACACAAAAGCACGATATGTTCATCGTGACATTAAAACAAGCAACATTCTGCTTGATGGAAAACTAAGAGCAAAGGTTGCTGATTTTGGATTGGTAAAGCTAGTTGAAAGGACTAATGATGAAGTTTTTGTAGCAACAAGACTTGTAGGAACGCCTGGCTACCTTCCACCTGAATCGGTGAAGGAGCTTCAAGTCACTCACAAAACAGATGTATTTGCATTTGGCGTGGTCCTGTCTGAGCTCATCACTGGCAAACGCGCATTGTTCCGTTCCAAACAGGAGAACACCACCATGAAATCACTCATTACAGTGATTTATGAAGTTTTTAACAGTAAAGACCCTGAAGCTGCTTTAGAAGCTGTTATAGATGGACACCTTCGAGGATGCTACCCTCTTGAATCTGTGTATGAGATGGCACAAATTGTTGAGTGGTGTTTAAATGAAGATCCAATTGAGAGGCCAGAGATGCGAGAGATTGTAATTTCATTGTCCAAAATTGCCATGGCCTCAACGGAGTGGGAAGCATCATTGGGTGGAAATAGCCAAGTCTTCAGTGGGGTATTCAATGGAAGATGA 1182 0.4129 MKITTITIVVVSTASLFAIAIFIIVFLKRKRAHTNSVEAPKTSKTAKAKKFSSSNSVLSKEALEEMAGFESERPVTYSVQEIEEATNNFDETRILGRGGYGNVYYGKLGKQEVAVKKMISNKSKEFYAELKVLCKIHHINVVELLGFASGEDHFYLVYEYVQSGSLSDHLHDPYLKGHEPLSWSTRIQIALDAAKGIEYIHDHTKARYVHRDIKTSNILLDGKLRAKVADFGLVKLVERTNDEVFVATRLVGTPGYLPPESVKELQVTHKTDVFAFGVVLSELITGKRALFRSKQENTTMKSLITVIYEVFNSKDPEAALEAVIDGHLRGCYPLESVYEMAQIVEWCLNEDPIERPEMREIVISLSKIAMASTEWEASLGGNSQVFSGVFNGR* 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte12g00729 393 Gene3D Phosphorylase Kinase; domain 1 42 160 - -
Pte12g00729 393 ProSitePatterns Protein kinases ATP-binding region signature. 95 117 IPR017441 GO:0005524
Pte12g00729 393 Pfam Protein kinase domain 90 362 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte12g00729 393 FunFam PTI1-like tyrosine-protein kinase 3 161 379 - -
Pte12g00729 393 ProSiteProfiles Protein kinase domain profile. 89 368 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte12g00729 393 SMART serkin_6 89 370 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte12g00729 393 Gene3D Transferase(Phosphotransferase) domain 1 161 383 - -
Pte12g00729 393 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 3 389 IPR044812 GO:0019199|GO:0045087
Pte12g00729 393 ProSitePatterns Serine/Threonine protein kinases active-site signature. 208 220 IPR008271 GO:0004672|GO:0006468
Pte12g00729 393 SUPERFAMILY Protein kinase-like (PK-like) 74 363 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte12g00729 Pte-Chr12 7515260 7518737 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte12g00729 44 394 Receptor kinase-like Gene Family AT1G51940 48.056 4.45e-118 355
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Pte12g00729 Pkinase 3.5e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte12g00729 - - qsa:O6P43_025257 566.229