Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte12g00709 ATGTCAGATGATTACCGCAATTCTTCATTTGATGCTGCGGACGAACGTAATGGCGCAATGTCAACTGGTCTTGAACATTCTTTCTCAGACTCGGACCTTTTGTGTGACGAGGAATATAGTTCTATATTTGGGAATAGGGAATGCGATGCTTGCGATGAAAATGGCTTTCCCCGTCGTTTGGACAATCATGCTAGTACTTATGACTTCCAAGAACCGACCTTCAATAACAGTGGGTCGGATTCTTCTGTGGGTTTTCCGCTACAGGATGAAGAAGTGAGACGAATGGTTGAAACTGAAAGAGAATATTGCCCTGCAGATGATTATCTCAGGAGGCTGCACAGCGGGGAGTTAAACTTGAATGCGAGAAGAGTAGCTCTTGGTTGGATTTGGAAGGCTCATTCCATATGGGGCTTTGGACCGTTGAGCTTTATCCTGGCTACAAACTATTTTGATAGATTCCTGTCAAGACATGATTTACGTAGTGAAGGCGGCGAAGCAGAGTGGGCGTACCAATTGTTAGCTGTAGCTTGCTTATCACTAGCAACTAAATTGGAGGAGTGTATTGTGCCTGATTATTTTCATTTGCAGGTAGGAAAACCCCAGTTTCTATTTGAAGGAAAAACCTTACAAAAGATGGAGCTTTTAGTATTAAGCAAACTAAGGTGGAGGATGCAAGCTTTTACTCCTTGCTCTTTCATTGAATACTTCCTCCGTAAAATTAATAATGGTCAGCATCCATCGACGGCATACCTCTCAACATCAGTACAACTCATTGTCCTCGCAACCAAAGGAATTGACTTCTTGGAATTCAGACCGTCTGAGATTGCTGCAGCTGTTGCAATATATATTTCAGGAGAACAGCAAAGGCTGGAGACTGACATTTTCATGTCCTACTTTGTGTTTGTAGAGAAGGGAAGAGTAGTGAGGTGTCTTGAAATGATCCAAGATATGACACCTGGTAATGGATGTACTCATATGGTTAGTGCACCATCCCCATTGGTACACCAAAGCCCTTCTGGTGTTCTTGATGGTACAAGCTTGAGCTTGAGAGTGAATGAATGA 1062 0.4284 MSDDYRNSSFDAADERNGAMSTGLEHSFSDSDLLCDEEYSSIFGNRECDACDENGFPRRLDNHASTYDFQEPTFNNSGSDSSVGFPLQDEEVRRMVETEREYCPADDYLRRLHSGELNLNARRVALGWIWKAHSIWGFGPLSFILATNYFDRFLSRHDLRSEGGEAEWAYQLLAVACLSLATKLEECIVPDYFHLQVGKPQFLFEGKTLQKMELLVLSKLRWRMQAFTPCSFIEYFLRKINNGQHPSTAYLSTSVQLIVLATKGIDFLEFRPSEIAAAVAIYISGEQQRLETDIFMSYFVFVEKGRVVRCLEMIQDMTPGNGCTHMVSAPSPLVHQSPSGVLDGTSLSLRVNE* 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte12g00709 353 FunFam D6-type cyclin 221 312 - -
Pte12g00709 353 Pfam Cyclin, N-terminal domain 94 224 IPR006671 -
Pte12g00709 353 Gene3D - 105 225 - -
Pte12g00709 353 SUPERFAMILY Cyclin-like 210 289 IPR036915 -
Pte12g00709 353 SMART cyclin_7 127 218 IPR013763 -
Pte12g00709 353 Pfam Cyclin, C-terminal domain 228 318 IPR004367 -
Pte12g00709 353 CDD CYCLIN_AtCycD-like_rpt2 228 314 - -
Pte12g00709 353 PANTHER CYCLINS 90 315 IPR039361 -
Pte12g00709 353 Gene3D - 94 286 - -
Pte12g00709 353 SUPERFAMILY Cyclin-like 86 224 IPR036915 -
Pte12g00709 353 CDD CYCLIN_AtCycD-like_rpt1 121 222 - -
Pte12g00709 353 FunFam D6-type cyclin 105 220 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte12g00709 Pte-Chr12 7217109 7219498 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte12g00709 89 306 Core Cell Cycle Gene Families AT5G65420 57.207 2.32e-82 250
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte12g00709 K18810 - jre:108998279 321.242