Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte12g00695 ATGGCTTCGACATATGATTGTTTGTCGTTCTCTTTGTCTCCCATGGAGATGCTTAGTTCTTCCGCTGATTCACAGTTCGTTTCATATGACCAGAGCTCTTCAGCTCCTTCTTCACAAAATGACTTTGTCGATAGTTTCTATGAAAATGGCTGGTTGAACTCAAAAGCGCTGGGAATTTTTTCCGAAGAAGAACAAGATCACCCAGGCAAAGAAGACCAAGCTCGAAGCATGGTAGACCCCTCTACTAGAAGCTTCATCGTCCCAGAAAACCAAAATAAATCAGTACAAAAGCTAGAGGACTTTTTGGCTGATCCTTCACCTACAGTAAGGTACTCTGACAGCCAAACGGAGACTCAGGATTCTTCACTAACCCAAGTATATGACCATGGTTCAGCCTACTTCAATGACCAGCAAAATCTGAAGGCGATAATTGTGTTTCAAGCTAATTCTATCACCTCAGGGTCTGAAGTCGACGACTCATCCTCTATCGGTAGAACTCAGCTAGCGGGAGGTGGTGGTGAGTTTGCTGGTCGCTCGACCGGCAAGAAGCTAGCTTTCTCCAACTGTAGCACTGGTAATTTGTCACTTACAGTCACCCGGAGTTCAGAAAAGGCCATAGTTTCTCTCAATTCCACAAAGAAAACTGCGGATACTTTTGGTCAGCGAACCTCAATTTACAGAGGAGTCACCAGGCACAGATGGACAGGAAGATATGAAGCGCATCTATGGGATAACAGCTGTAGAAGAGAGGGTCAGGCAAGAAAAGGGCGACAAGGATGGAAAAATTTTAAATTTAACTTGAATTTGTCATATTCAGGTGGATATGACAAAGAAGACAAAGCTGCAAGAGCTTATGATTTAGCTGCTCTAAAATATTGGGGACCGTCTGCTACCACCAACTTTCCCGTTGACGAGTACAACAAGGAACTGAAAGAGATGGCAATCGTGTCTAAGCAAGAATTCATAGCATCATTGAGAAGAAAAAGTAGTGGTTTTTCTAGGGGAGCATCTATTTACAGGGGTGTCACAAGGCATCATCAACAAGGAAGATGGCAAGCAAGAATTGGACGCGTTGCAGGGAACAAAGACTTGTACCTTGGAACTTTTGCAACTGAGGAGGAAGCAGCGGAGGCCTATGACATTGCTGCCATAAAGTTCAGAGGATCAAATGCTGTTACCAACTTTGAGATGAGTAGGTATGATGTTGATGCTATTCAAAAAAGTGCTCTTCCTGTTGGTGGGGTGTCAAAACGCGTGAAGCTTTCATCAGAATCAGAACAACCATCTGCAACCAACAGTAATCAGCAACTCCATTGCTCCACGATAGGAAGCTATAGAAATTTCTCAACTGTCCAAGGAGTTTCCTCTATTCCTTGTGCAATCCCTTTTGATGCTGCAACAACATACTACCACCAAAACCTCCTCCACCATTTTCAGGCTAACAATTTCAGTGCTGTAGATTTCTCTGTTACTGCGTCTCCAGTGACTATATTGCCACCGTCTTCTGATTTTTTCCGTTGGCATCATCAGCCGTATTGA 1539 0.4373 MASTYDCLSFSLSPMEMLSSSADSQFVSYDQSSSAPSSQNDFVDSFYENGWLNSKALGIFSEEEQDHPGKEDQARSMVDPSTRSFIVPENQNKSVQKLEDFLADPSPTVRYSDSQTETQDSSLTQVYDHGSAYFNDQQNLKAIIVFQANSITSGSEVDDSSSIGRTQLAGGGGEFAGRSTGKKLAFSNCSTGNLSLTVTRSSEKAIVSLNSTKKTADTFGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQARKGRQGWKNFKFNLNLSYSGGYDKEDKAARAYDLAALKYWGPSATTNFPVDEYNKELKEMAIVSKQEFIASLRRKSSGFSRGASIYRGVTRHHQQGRWQARIGRVAGNKDLYLGTFATEEEAAEAYDIAAIKFRGSNAVTNFEMSRYDVDAIQKSALPVGGVSKRVKLSSESEQPSATNSNQQLHCSTIGSYRNFSTVQGVSSIPCAIPFDAATTYYHQNLLHHFQANNFSAVDFSVTASPVTILPPSSDFFRWHHQPY* 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte12g00695 512 ProSiteProfiles AP2/ERF domain profile. 225 302 IPR001471 GO:0003700|GO:0006355
Pte12g00695 512 SUPERFAMILY DNA-binding domain 337 398 IPR016177 GO:0003677
Pte12g00695 512 CDD AP2 337 398 IPR001471 GO:0003700|GO:0006355
Pte12g00695 512 PRINTS Ethylene responsive element binding protein signature 284 304 IPR001471 GO:0003700|GO:0006355
Pte12g00695 512 PRINTS Ethylene responsive element binding protein signature 226 237 IPR001471 GO:0003700|GO:0006355
Pte12g00695 512 SMART rav1_2 225 308 IPR001471 GO:0003700|GO:0006355
Pte12g00695 512 SMART rav1_2 338 402 IPR001471 GO:0003700|GO:0006355
Pte12g00695 512 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 92 433 - -
Pte12g00695 512 Gene3D AP2/ERF domain 338 398 IPR036955 GO:0003700|GO:0006355
Pte12g00695 512 Gene3D AP2/ERF domain 225 304 IPR036955 GO:0003700|GO:0006355
Pte12g00695 512 ProSiteProfiles AP2/ERF domain profile. 338 396 IPR001471 GO:0003700|GO:0006355
Pte12g00695 512 FunFam AP2-like ethylene-responsive transcription factor 337 398 - -
Pte12g00695 512 Pfam AP2 domain 338 388 IPR001471 GO:0003700|GO:0006355
Pte12g00695 512 CDD AP2 224 304 IPR001471 GO:0003700|GO:0006355
Pte12g00695 512 SUPERFAMILY DNA-binding domain 224 303 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte12g00695 Pte-Chr12 6977662 6982184 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte12g00695 51 469 AP2-EREBP Transcription Factor Family AT5G10510 55.102 1.80e-145 427
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Pte12g00695 AP2 0.00028 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte12g00695 K09285 - qsa:O6P43_033249 632.098