Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte12g00675 ATGGGAGACGTTGCTAAGGACCTTACTGCTGGTACCATTGGAGGGGCAGCACAATTGATATGTGGACACCCCTTTGACACCATCAAGGTCAAGCTCCAAAGCCAACCTGCACCACTTCCTGGTCAATCTCCAAAGTACACTGGTGCTATTGATGCCGTCAAGCAAACTATGGCTGCCGAAGGGCCAAGGGGTTTGTACAAGGGTATGGGTGCTCCACTTGCTACTGTAGCAGCATTCAACGCTGTCCTCTTCACAGTAAGAGGACAGATGGAGGCATTATTAAGGTCCCAACCCGGTGCTCCCCTCACCATTAATCAACAGTTTGTTTGTGGAGCTGGAGCCGGGGTTGCTGTTTCCTTTCTTGCTTGCCCCACGGAACTGATCAAGTGCAGGTTGCAAGCACAAAGTGCATTGGCAACTGCAGACTCAGTTGGAGTTGGCGTGGCAGTGAGGTATGGAGGACCTTTGGATGTGGCCAGGCATGTACTTCGTTCGGAAGGCGGCACAAGAGGTCTATTCAAAGGCTTAGTACCCACAATGGCACGTGAAATACCTGGAAATGCTGTGATGTTCGGCGTATACGAAGGAATCAAACAGTTGATTGCAGGAGGGAAAGACACTTCTGGATTAGGAAGAGGTTCTTTGATTGTGGCAGGAGGCCTGGCTGGAGCTTCCTTTTGGTCACTGGTGTACCCTACTGACGTTGTCAAGAGTGTAATTCAGGTAGATGATTTCAGAAATCCAAAGTTTTCTGGCTCACTTGACGCTTTCAAAAAGATTCGAGCGTCAGAAGGTTTCAAAGGGCTCTACAAGGGGTTTGGTCCTGCAATGGCTCGCAGTGTTCCTGCCAATGCTGCTTGTTTCTTGGCATATGAGATGACAAGGTCAGCTCTGGGATAG 900 0.4978 MGDVAKDLTAGTIGGAAQLICGHPFDTIKVKLQSQPAPLPGQSPKYTGAIDAVKQTMAAEGPRGLYKGMGAPLATVAAFNAVLFTVRGQMEALLRSQPGAPLTINQQFVCGAGAGVAVSFLACPTELIKCRLQAQSALATADSVGVGVAVRYGGPLDVARHVLRSEGGTRGLFKGLVPTMAREIPGNAVMFGVYEGIKQLIAGGKDTSGLGRGSLIVAGGLAGASFWSLVYPTDVVKSVIQVDDFRNPKFSGSLDAFKKIRASEGFKGLYKGFGPAMARSVPANAACFLAYEMTRSALG* 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte12g00675 299 Gene3D Mitochondrial carrier domain 2 298 IPR023395 -
Pte12g00675 299 ProSiteProfiles Solute carrier (Solcar) repeat profile. 210 297 IPR018108 -
Pte12g00675 299 PANTHER MITOCHONDRIAL BASIC AMINO ACIDS TRANSPORTER-RELATED 4 298 - -
Pte12g00675 299 SUPERFAMILY Mitochondrial carrier 3 292 IPR023395 -
Pte12g00675 299 ProSiteProfiles Solute carrier (Solcar) repeat profile. 102 200 IPR018108 -
Pte12g00675 299 ProSiteProfiles Solute carrier (Solcar) repeat profile. 2 93 IPR018108 -
Pte12g00675 299 FunFam mitochondrial carnitine/acylcarnitine carrier-like protein 2 298 - -
Pte12g00675 299 Pfam Mitochondrial carrier protein 216 298 IPR018108 -
Pte12g00675 299 Pfam Mitochondrial carrier protein 4 95 IPR018108 -
Pte12g00675 299 Pfam Mitochondrial carrier protein 103 202 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte12g00675 Pte-Chr12 6648681 6651973 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte12g00675 22 293 Antiporters AT1G79900 33.574 1.25e-40 141
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte12g00675 K15109 - twl:119980861 526.939
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte12g00675 12 6648681 6651973 Pte12g00675 12 6648681 6651973 RCT