Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte12g00666 ATGGAATCTACTCAGACTCAAAGTCATGATGAAAATGAAGAATTGGAAGAAAATCACAACCCCAGTTTGCATGAGCCGTGGCAAGCTGCAACTACTGGCTTAGATGAAGCTTTGATCAAGACCATAACAGTTTGCAAGTACAAGAAAGGAGACGGGTTAGTTGAAGTTACAGATTGCTCTGTCTGTCTCAGTGAATTTGAAGAAGATGAATGTGTTAGGCTCTTGCCCAAATGCAATCATGCTTTTCATCTTCCATGCATTGATACATGGCTCAAGTCCCACTCAAATTGTCCTTTGTGTAGAGCTAACATATTTTGCTTCAATACTCCATCATTTCAATTGTCAACTCCTCCAGTAATAGAAATCTCTTCAACGAACGAAGGTCTTTCTCAAACTCAAAACGAAAATGAAATCTCATCTGAAAAGGGTGTCATAGAAGAAGGGATATCAATGCATTACCGTACTGTAGTCCCAAAACCTGCATTAAGTGTCTTCAGTGATTTGGGTAATTCACATGGAAGAGATACAGTCATTGAGATCAAAGATGAAGGATACAATTCTTTTGTCATAAGAAGGTCAATCTCAATGGATCTTTCACTTCAAACTGAAAAATGTCTCTCAGTTGCTGATGTTCTGCAAATTAATCAAGATGATGAAGACACTCATGAACAAGATCAATGCTCAACTGAGGTTGGATGCTCACTAGGAGAAAGTAGCAGGTCTAGACATAAAAGAAGGGTCCTGCATCGTGCATTGAGTCCTATAGCAATGAAGAGATCATTTTCCAGTGGGAGATTTTTGCTCTCCACACATGGCAGAGATCAACAGCAAGCTACTGTCCTCGTCTGA 849 0.3969 MESTQTQSHDENEELEENHNPSLHEPWQAATTGLDEALIKTITVCKYKKGDGLVEVTDCSVCLSEFEEDECVRLLPKCNHAFHLPCIDTWLKSHSNCPLCRANIFCFNTPSFQLSTPPVIEISSTNEGLSQTQNENEISSEKGVIEEGISMHYRTVVPKPALSVFSDLGNSHGRDTVIEIKDEGYNSFVIRRSISMDLSLQTEKCLSVADVLQINQDDEDTHEQDQCSTEVGCSLGESSRSRHKRRVLHRALSPIAMKRSFSSGRFLLSTHGRDQQQATVLV* 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte12g00666 282 MobiDBLite consensus disorder prediction 1 21 - -
Pte12g00666 282 MobiDBLite consensus disorder prediction 1 26 - -
Pte12g00666 282 SUPERFAMILY RING/U-box 43 106 - -
Pte12g00666 282 CDD RING-H2_EL5-like 58 101 - -
Pte12g00666 282 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 19 105 IPR013083 -
Pte12g00666 282 SMART ring_2 59 100 IPR001841 -
Pte12g00666 282 PANTHER RING-H2 FINGER PROTEIN ATL16 19 246 IPR044600 GO:0016567|GO:0016740
Pte12g00666 282 ProSiteProfiles Zinc finger RING-type profile. 59 101 IPR001841 -
Pte12g00666 282 FunFam RING-H2 finger protein ATL54 34 107 - -
Pte12g00666 282 Pfam Ring finger domain 58 101 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte12g00666 Pte-Chr12 6574604 6577556 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte12g00666 13 276 C3H Transcription Factor Family AT5G17600 38.246 2.48e-44 152
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte12g00666 - - qsa:O6P43_025149 316.235
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte12g00666 12 6574604 6577556 Pte12g00666 12 6574604 6577556 RCT