Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte12g00664 ATGTCGAAACCACCCGATTTTGAGAGTTACCCTCCATCTCAACAGCTGCAATATCAGCAAAGTTCCTCTCCTACGCTAGTCGTCCTCACTATCCTTCTCTTAGTTTTCTTCTTCACAGGTTTCTTCTTGGTTTATTTCTGGAGATGCTTCAACTACAGCCTTCTACGCAATTGGGGTTTTGATCAAACACAATCTGCCATTCTAAACCAGCCTGCCAATGAAGGCCTTGATCCTTCACTGCTTCAATCCTTCCCTGTCTTTCTATATTCATCAGTGAAAGATTTACGTGAAGATAAATATGGCCTAGAATGTGCAATTTGCTTGCTAGAGTTTGAGGATGACAGTTTGCTTCGTTTGTTAACAATCTGTTGCCATGTTTTTCACAAAGAATGTATTGATCTCTGGCTTACATCTCACAAAACTTGCCCGGTTTGCCGAAGAGATCTTGACTTGTTGATCAAGGCAGCTGAGAAAACTCCTGTACTGAGTGAACATGGTAGCATGCACGACAATACTAATAATGCCGAGACATCAAGAGACGAAGATGTACGCATAGACATCAGAGAAAGTGATGAGCAGGAAGATCATCACAGTGACAATGATCATGACGAAGAGCACGATGAACACGATGACAAAGTTGAATATGAGAGCTCAGGGTTCGCATTCAAACAGAAAGTAAAGGGTAAACAGAAGGATGTGGAAAGATTTTCCAGGTCGCATTCCACTGGGCATTCAATATTTTCAATCAGAGGAGGAGGAGAAAGTGAAAGAGACGGAGAAGGAGGAGGAGCAAGTGAAAGAGGTGGAGAAGAAGAAGGAAGAGGAGAATCCATTGATAGACATACACTGAGGTTGCCTGAGAATATCAAGGCGAAACTATTAAGAGGGCACCACTGTACAAGAAGCTGCACAACGTTTAAGGAGATGGCAAAAGATGGAACTTGTAACTGTGGATTTGCAGAGGTGTCGGGCTCCTCCTCAGTGAATAATGCCAGAAAATCTTGA 1005 0.4279 MSKPPDFESYPPSQQLQYQQSSSPTLVVLTILLLVFFFTGFFLVYFWRCFNYSLLRNWGFDQTQSAILNQPANEGLDPSLLQSFPVFLYSSVKDLREDKYGLECAICLLEFEDDSLLRLLTICCHVFHKECIDLWLTSHKTCPVCRRDLDLLIKAAEKTPVLSEHGSMHDNTNNAETSRDEDVRIDIRESDEQEDHHSDNDHDEEHDEHDDKVEYESSGFAFKQKVKGKQKDVERFSRSHSTGHSIFSIRGGGESERDGEGGGASERGGEEEGRGESIDRHTLRLPENIKAKLLRGHHCTRSCTTFKEMAKDGTCNCGFAEVSGSSSVNNARKS* 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte12g00664 334 PANTHER RING FINGER DOMAIN-CONTAINING 13 155 - -
Pte12g00664 334 ProSiteProfiles Zinc finger RING-type profile. 104 146 IPR001841 -
Pte12g00664 334 FunFam E3 ubiquitin-protein ligase ATL6 64 151 - -
Pte12g00664 334 SUPERFAMILY RING/U-box 80 152 - -
Pte12g00664 334 SMART ring_2 104 145 IPR001841 -
Pte12g00664 334 CDD RING-H2_EL5-like 103 146 - -
Pte12g00664 334 MobiDBLite consensus disorder prediction 174 218 - -
Pte12g00664 334 Pfam Ring finger domain 103 146 IPR001841 -
Pte12g00664 334 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 62 151 IPR013083 -
Pte12g00664 334 MobiDBLite consensus disorder prediction 225 239 - -
Pte12g00664 334 MobiDBLite consensus disorder prediction 162 281 - -
Pte12g00664 334 MobiDBLite consensus disorder prediction 251 281 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte12g00664 Pte-Chr12 6564554 6565558 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte12g00664 24 295 Rapid Response to Elicitors AT2G35000 33.452 2.43e-39 141
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte12g00664 - - qsa:O6P43_025146 244.973