Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte12g00662 ATGGCACCTTCGTTTCAACAAAGCTCAAACACAGTCTGCGTGTTGGACGCTTCAGGACAACTGGGGTCAGCCCTTGTAGAGCGACTTCTTCGTAGGGGTTACACTGTACATGCTGCTGTTCAACAACATGGTGAATTGCAATTGGATACAGTTTCTCGTGATACAGATAAGTTGAAGGTTTTCTATGCAGATCCCTTTGACTATCACAGTATACTTGATGCACTTAAGGGCTGCTCTGGCTTGTTTTACACTTTTGAACCGCCAATTGACCAACCCAACTATGATGAATACATGGCAGATGTTGAGGTGAGAGCCGCACATAATGTGCTTGAAGCTTGTGCTCAGACAGATACCATAGACAAAGTGGTTTTCACATCCTCAGCAACAGCTGTCATTTGGAGGGAAAATCGAAGGCCTCTGGGACTGGATTTCGATGAAAGACATTGGAGCGATGTCAATTTTTGTCGCAAATTCAAGTTGTGGCACGCTCTGTCAAAAACACTAGCTGAGAAGACAGCATGGGCTTTGGCAATGGACAGAGGTGTGAATATGGTGTCTATCAACTCAGGGTTGCCGATGAGTCCTGAATTGTCAATAAATACTCCATATTTGAAAGGAGCAGCTGAGATGTATGAAGATGGTGTCTTTGTCACTGTTGATCTAGACTTTTTGGTGAATGCCCACATCTGTGTTTACGAAGATATCTCATCTTACGGCCGATATTTGTGCTTCAATCACATTATCAATTCTGGTGATGCTGCTGTCAAGCTTGCAAAGAAGTTGACTCTTTCTGCATCTTCATGGCCCCAAAGCTGTGACCAAGATCTGAGTATTATCCAGCAGAGAATTAGCACCAAGAAGTTGAAGAAATGTATGGTGGAGTTCGAAGGTTGA 894 0.4374 MAPSFQQSSNTVCVLDASGQLGSALVERLLRRGYTVHAAVQQHGELQLDTVSRDTDKLKVFYADPFDYHSILDALKGCSGLFYTFEPPIDQPNYDEYMADVEVRAAHNVLEACAQTDTIDKVVFTSSATAVIWRENRRPLGLDFDERHWSDVNFCRKFKLWHALSKTLAEKTAWALAMDRGVNMVSINSGLPMSPELSINTPYLKGAAEMYEDGVFVTVDLDFLVNAHICVYEDISSYGRYLCFNHIINSGDAAVKLAKKLTLSASSWPQSCDQDLSIIQQRISTKKLKKCMVEFEG* 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte12g00662 297 Pfam NAD(P)H-binding 17 130 IPR016040 -
Pte12g00662 297 Gene3D - 4 297 - -
Pte12g00662 297 FunFam Cinnamoyl-CoA reductase-like SNL6 isoform A 4 297 - -
Pte12g00662 297 CDD FR_SDR_e 12 293 - -
Pte12g00662 297 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 10 270 - -
Pte12g00662 297 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 6 257 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte12g00662 Pte-Chr12 6537395 6539313 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte12g00662 11 259 Monolignol Biosynthesis Gene Families AT5G58490 37.262 1.31e-41 144
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte12g00662 - - qsa:O6P43_033333 471.085
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte12g00662 12 6537395 6539313 Pte12g00662 12 6537395 6539313 RCT