Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte12g00658 ATGCCGGCCATAGCAGCATTGTATTCAGATTCTCCTTCCATTAATCACCAGAATCTCTCTGATCTTCAGAAAGTGGCTGTTCTTGGACATGGCAATGGTGGGACTGTGTACAAAGTTCACGACAAGAAAAACCAATCTTTTTATGCATTGAAAGTCATCAGGTTCAATGGGAACATTGCAAACGGGATCAAACAACAAGCGTATCTCGAGGCTCAGATTCTGAAACGAGTGGATTCCCCTTATATAGTACGTTGTCATGCAGTGTTTGATAATGGGATCAATGAGACAGGCACAGTAGGTGAGATTTGCTTTTCCATGGAGTACATGGAAGGTGGATCATTGGATGACGTGCTGCAAGCACATCACAGATTGCCTGAAGAGGTAATCTCCATCTTGGCCAAACGAGTCTTGGAAGGACTCAAATACTTACATGGGATGCAAATAGTTCATAGGGATATCAAACCATCCAATTTGCTTGTCAACGTTGAAGGAGAAGTTAAGATTGCAGACTTTGGAGCCAGTCACATGGTGGCGAGCAAGTTTCAAGCACGTAACTTGAGCACAGGCACTTGTGCTTACATGAGTCCTGAAAGATTTGATCCAGAGAATTGGGATGGTGAGAATGCGGATGAATTTGCAGGAGATGTATGGGCAGTTGGAGTGGTCATGTTGGAGTGTCTGGTGGGGCATTTTCCATTGATTGGTCCGGACCAGAAACCAGATTGGGCAACGTTGATGTGTGCTATATCGTTTGGTGAAAAGCTGGAGGTGCCAGAGATGGCATCCCCAGAGTTTGAGAGTTTTGTACACAGGTGTTTAGAAAAGGATTGGAGGAAACGAGGGACTGTAGTTGAACTCTTAGACCACCCTTTTGTGAATGGAAGCCGTTTCTGTTCCACAAAAGGATTGGTTGATTATGTTTTGCATAGTTAA 933 0.4416 MPAIAALYSDSPSINHQNLSDLQKVAVLGHGNGGTVYKVHDKKNQSFYALKVIRFNGNIANGIKQQAYLEAQILKRVDSPYIVRCHAVFDNGINETGTVGEICFSMEYMEGGSLDDVLQAHHRLPEEVISILAKRVLEGLKYLHGMQIVHRDIKPSNLLVNVEGEVKIADFGASHMVASKFQARNLSTGTCAYMSPERFDPENWDGENADEFAGDVWAVGVVMLECLVGHFPLIGPDQKPDWATLMCAISFGEKLEVPEMASPEFESFVHRCLEKDWRKRGTVVELLDHPFVNGSRFCSTKGLVDYVLHS* 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte12g00658 310 SMART serkin_6 22 292 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte12g00658 310 ProSitePatterns Serine/Threonine protein kinases active-site signature. 148 160 IPR008271 GO:0004672|GO:0006468
Pte12g00658 310 ProSiteProfiles Protein kinase domain profile. 22 292 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte12g00658 310 Gene3D Transferase(Phosphotransferase) domain 1 106 304 - -
Pte12g00658 310 Gene3D Phosphorylase Kinase; domain 1 3 105 - -
Pte12g00658 310 CDD PKc_MAPKK_plant_like 20 294 - -
Pte12g00658 310 FunFam Mitogen-activated protein kinase kinase 1 3 110 - -
Pte12g00658 310 PANTHER MITOGEN-ACTIVATED KINASE KINASE KINASE 16 296 - -
Pte12g00658 310 Pfam Protein kinase domain 23 292 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte12g00658 310 SUPERFAMILY Protein kinase-like (PK-like) 20 296 IPR011009 -
Pte12g00658 310 ProSitePatterns Protein kinases ATP-binding region signature. 28 51 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte12g00658 Pte-Chr12 6496867 6497799 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte12g00658 17 293 MAP Kinase Kinase Gene Family AT1G32320 53.430 1.09e-97 288
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE7 Pte12g00658 Pkinase 5.5e-58 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte12g00658 K20604 - gmx:100817973 430.639