Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte12g00656 ATGGATAACACCGGTGGAAGTGGCGAAGGTGGCGGCACGCCGCCCGCAACGCCAGCTCCGGCTCCTATTCCAAACGCAAATGCACCGCCTCCTTTTCTCAGCAAGACTTATGATATGGTAGATGACCCGTCCAATGATTCGGTCGTCTCTTGGAGTGCTACCAATAATAGCTTTGTGGTCTGGAAACCACCAGAGTTTGCCAGGGACTTGTTACCGAAGTACTTCAAGCACAACAACTTCTCGAGCTTTGTTAGACAATTGAACACATACCAACAAAATGGAGCAGAAGAAGGAAAATGGAAAAGAAAGCAATCCTCAGGGTTTCAGGAAGGTCGATCCAGACCGCTGGGAATTTGCAAATGA 363 0.4876 MDNTGGSGEGGGTPPATPAPAPIPNANAPPPFLSKTYDMVDDPSNDSVVSWSATNNSFVVWKPPEFARDLLPKYFKHNNFSSFVRQLNTYQQNGAEEGKWKRKQSSGFQEGRSRPLGICK* 121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte12g00656 120 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 25 111 IPR027725 -
Pte12g00656 120 PRINTS Heat shock factor (HSF) domain signature 32 55 IPR000232 GO:0003700|GO:0006355|GO:0043565
Pte12g00656 120 PRINTS Heat shock factor (HSF) domain signature 70 82 IPR000232 GO:0003700|GO:0006355|GO:0043565
Pte12g00656 120 PRINTS Heat shock factor (HSF) domain signature 83 95 IPR000232 GO:0003700|GO:0006355|GO:0043565
Pte12g00656 120 MobiDBLite consensus disorder prediction 15 29 - -
Pte12g00656 120 FunFam Heat stress transcription factor B-4 24 117 - -
Pte12g00656 120 SMART hsfneu3 28 120 IPR000232 GO:0003700|GO:0006355|GO:0043565
Pte12g00656 120 MobiDBLite consensus disorder prediction 1 39 - -
Pte12g00656 120 SUPERFAMILY "Winged helix" DNA-binding domain 30 91 IPR036390 -
Pte12g00656 120 Gene3D - 25 116 IPR036388 -
Pte12g00656 120 Pfam HSF-type DNA-binding 32 96 IPR000232 GO:0003700|GO:0006355|GO:0043565
Pte12g00656 120 MobiDBLite consensus disorder prediction 93 120 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte12g00656 Pte-Chr12 6491330 6493746 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte12g00656 1 116 HSF AT4G17750 58.197 7.57e-41 139
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Pte12g00656 HSF_DNA-bind 1.4e-23 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte12g00656 K09419 - gmx:100794897 144.05
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte12g00656 12 6491330 6493746 Pte12g00656 12 6491330 6493746 RCT