Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte12g00647 ATGCCACCACCTCCAGCTCTCTTGGAACCTTCATTGGAAGTAGATGTGGACATATATTCAAGCCACTTCACCGATACTATTGTACGTACAGACATGATTCCTGTCCCTATGATGCCACCTGAACGTTCCACGTATTCCGAGGGAGGTCTGCTAATGGAAGAGGAGAAGTCTTTGGCAATGGAGATTGCAGCGTCCTCAGTAGATGAGCTTGTGAAGATGTGTCATGCAGGAGAGCCTCTTTGGTTAAGGAACGGTGAGACTGGAAGGGAAGTGCTGAATCTTGAAGAGTATGGTAGACTGTTTTCATGGCCTGGTAATATTAAGCAGAATTCAAGTGAGCTTAGAACAGAAGCAACCCGTGACAGCTCTCTTGTCATCATGAATACCATCACTCTTGTTGACGCTTTCCTTGACGCACTCAAGTGGATGGAGTTGTTTCCCTCAATTGTTTCAAGAGCCAAAACTGTCCAAGTTATTTCTTCCAGAGCTTCCGGTCATCAAAGCGGTTCACTTCAACTGATGTATGCAGAGCTGCAAGTTCTTTCTCCATTGGTGCCCACCAGAGAGACACATTTCCTTCGATATTGTAAGCAGAATGCTGAGGAGGGAACATGGATCATAGTTGATTTTCCCCTTGACAGCTTGCATGACAATCTACAGCCTCCTTGTCCTAGATACAGGAGACGTCCCTCAGGCTGTGTGATTCAAGATATGCCAAATGGTTATTCAAGGGTAGTTTGGGTTGAACATGCCGAGGTTGAGGAGAAGCCTGTGCATCAGATATTCAGCAACTTCGTGTACAATGGGATGGCCTTTGGAGCTCACCGCTGGTTAGGGGTGTTGCAGCGACAATGTGAGAGAGTTGCAAGTCTCATGGCCAGAAATATTTCAGACCTTGGAGTGATACCATCTCCTGAAGCACGCAAGAACTTAATGAAACTAGCTCAAAGAATGATAAGAACATTTAGTGTGAACATGAGCACCTCCAGTGGCCAATCATGGACTGCTTTATCAGATTCATCTGATGACACTACAAGAATAACAACTAGAAAAATGGCCGAACCTGGTCAACCCAATGGGGTCATTCTTAGTTCTGCACAAACCACTTGGCTGCCTTATGCTCACTACCAAGTCTTTGATCTCCTTAGGGATGAACGCCGCAGATCTCAGTTGGATGTTCTTGCTAATGGGAATTCCTTACATGAAGTGGCTCATATTGCAAATGGTTCACACCCAGGAAATTGCATTTCGCTCCTCCGAATAAATGTGGCCAGCAACTCATCCCATCATGTAGAGCTTATGCTGCAAGAGAGTTGCACAGATCAGTCTGGAAGTATCATAGTTTATACTACTGTAGAGGTGGAATCCATCCAGCTAGCCATGAGCGGGGAAGACCCTTCTTGCATTCCTCTTCTTCCACAAGGATTTATTATAGTTCCAACCGGTTCTCCTCCAAAACAGTCAGCTATTGCTACCCTTGAAAACAATGCCTCTAAAGGAGGACATGAATCCAAAACCACAGGTTGTCTCCTTACAGTGGGGATGCAAGTACTTGCAAGCACCATACCTTCTGCTAAGCTAAACCTCTCCAGCGTTACTGCCATCAACAACCATCTCTGCAGCACCGTGCATCAAATTACCAGTTCTCTTAGCAGTAGTATTGGTGCTACCTGTCCTGGTAACGACGTTGTTGTTGGCTCCTTTGCTGAACCAACCATTGTCACAGCCCCAAAGCACTAG 1740 0.458 MPPPPALLEPSLEVDVDIYSSHFTDTIVRTDMIPVPMMPPERSTYSEGGLLMEEEKSLAMEIAASSVDELVKMCHAGEPLWLRNGETGREVLNLEEYGRLFSWPGNIKQNSSELRTEATRDSSLVIMNTITLVDAFLDALKWMELFPSIVSRAKTVQVISSRASGHQSGSLQLMYAELQVLSPLVPTRETHFLRYCKQNAEEGTWIIVDFPLDSLHDNLQPPCPRYRRRPSGCVIQDMPNGYSRVVWVEHAEVEEKPVHQIFSNFVYNGMAFGAHRWLGVLQRQCERVASLMARNISDLGVIPSPEARKNLMKLAQRMIRTFSVNMSTSSGQSWTALSDSSDDTTRITTRKMAEPGQPNGVILSSAQTTWLPYAHYQVFDLLRDERRRSQLDVLANGNSLHEVAHIANGSHPGNCISLLRINVASNSSHHVELMLQESCTDQSGSIIVYTTVEVESIQLAMSGEDPSCIPLLPQGFIIVPTGSPPKQSAIATLENNASKGGHESKTTGCLLTVGMQVLASTIPSAKLNLSSVTAINNHLCSTVHQITSSLSSSIGATCPGNDVVVGSFAEPTIVTAPKH* 580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte12g00647 579 SMART START_1 61 287 IPR002913 GO:0008289
Pte12g00647 579 Gene3D - 114 276 IPR023393 -
Pte12g00647 579 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 38 550 IPR042160 -
Pte12g00647 579 Pfam START domain 62 287 IPR002913 GO:0008289
Pte12g00647 579 SUPERFAMILY Bet v1-like 53 289 - -
Pte12g00647 579 SUPERFAMILY Bet v1-like 305 545 - -
Pte12g00647 579 CDD START_ArGLABRA2_like 56 286 - -
Pte12g00647 579 ProSiteProfiles START domain profile. 52 290 IPR002913 GO:0008289
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte12g00647 Pte-Chr12 6317261 6320607 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte12g00647 1 554 Homeobox Transcription Factor Family AT5G46880 59.380 0.0 657
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte12g00647 - - qsu:112010517 854.358