Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte12g00638 ATGGGCAACAGAGATGTGGATAAAACTCCAAAAGATAAGGAGTCAAAGACACCTTCTGCCAATTCGCAGGAGCAGGCCTCAACCACCACTGCAGGTGCAGTAAATCCTGAGTGGTCAGGCTTTCAGGCTTATACTCCCATTCCACCTCATGGGTTCTTGGCTTCAAATCCAGCTCACCCATATATGTGGGGAGTTCAGCATATTATGCCCCCCTATGGTACTCCATCTCATCCTTATGTTGCGATGTATCCCCCCGGTGGCATATATGCTCATCCATCCATTCCTCCGGGATCATATCCATTTAGTCCTTTTTATATGCCTTCTCCAAACGGTATTGCAGATGCTTCAGGAAATACTCCTGGGAGCATGGAAGGTGATGCAAAGCCTCAGGAGGTTAAGGAAAAGTTGCCAATCAAAAGATCAAAAGGAAGTCTGGGCAACTTGAATATGATTACAGGCAAAAATAGTGAACTTGTTAAAACGTCAGGGACATCTGCCAATGGAATTCATTTAAAAAGTGGAGAAAGTGGTAATGAAGGTTCTAGTGAAGGAAGTTATTCGAATTCTCAGAACGACTCTCAACATAAGTCAGGAGGAAGACAAGATTCATTAGAAGAGCTGGGTCAGAATGGAAATTCTGTGCATGCTTATCAGAACGGCTTGTCAAACACACCTCATTCAATGACCAATCAAACCATGAATATGATGGCAATTACTGCTTCTGGTGCTCCTGGAGCTGTTCCTGGTCCCACAACAAACTTGAATATTGGTATGGATTATTGGGGTACTCCAACAACTTCAGCCATTCCAGCAATATGTGGGAAGGTTCCTTCTACCCCTGTTACTGGAGCGACAGTTACTACTGGTTCACTGGACAGCTCACAACCCTGGATACAGGATGAAAGAGAGGTTAAAAGACAAAGGAGGAAGCAGTCAAACAGAGAATCTGCTCGTCGGTCCAGGTTGCGTAAGCAGGCGGAATGTGATGAGCTGGCTCAGCGTGCTGAGGTGTTGAAAGACGAAAATGCTACTCTTCGGTCGGAAGTAAATCAGATTAGGAGAGAGTATGAACAGCTTCTTGCAGAGAATGCCTCCCTGAAGGAGAGACTTGGGGAAGCTCCTAGCAATGAAGATGATAGGCCTGGGGGAAATGAGCAGCATTTGATCAATGATGCTCCAGAGTCTGGGCAGACAGAGGTTGTGAAGGATGGTGCTTAG 1218 0.4573 MGNRDVDKTPKDKESKTPSANSQEQASTTTAGAVNPEWSGFQAYTPIPPHGFLASNPAHPYMWGVQHIMPPYGTPSHPYVAMYPPGGIYAHPSIPPGSYPFSPFYMPSPNGIADASGNTPGSMEGDAKPQEVKEKLPIKRSKGSLGNLNMITGKNSELVKTSGTSANGIHLKSGESGNEGSSEGSYSNSQNDSQHKSGGRQDSLEELGQNGNSVHAYQNGLSNTPHSMTNQTMNMMAITASGAPGAVPGPTTNLNIGMDYWGTPTTSAIPAICGKVPSTPVTGATVTTGSLDSSQPWIQDEREVKRQRRKQSNRESARRSRLRKQAECDELAQRAEVLKDENATLRSEVNQIRREYEQLLAENASLKERLGEAPSNEDDRPGGNEQHLINDAPESGQTEVVKDGA* 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte12g00638 405 MobiDBLite consensus disorder prediction 117 150 - -
Pte12g00638 405 MobiDBLite consensus disorder prediction 371 385 - -
Pte12g00638 405 CDD bZIP_plant_GBF1 306 356 IPR045314 GO:0003700|GO:0006355
Pte12g00638 405 Gene3D - 304 358 - -
Pte12g00638 405 MobiDBLite consensus disorder prediction 164 207 - -
Pte12g00638 405 Pfam Disordered region downstream of MFMR 134 270 - -
Pte12g00638 405 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 308 323 IPR004827 GO:0003700|GO:0006355
Pte12g00638 405 SUPERFAMILY Leucine zipper domain 304 360 IPR046347 GO:0003700|GO:0006355
Pte12g00638 405 MobiDBLite consensus disorder prediction 19 35 - -
Pte12g00638 405 Pfam bZIP transcription factor 301 363 IPR004827 GO:0003700|GO:0006355
Pte12g00638 405 Coils Coil 321 369 - -
Pte12g00638 405 PANTHER G-BOX-BINDING FACTOR 3-RELATED 1 381 IPR044827 GO:0003700|GO:0006355|GO:0043565
Pte12g00638 405 MobiDBLite consensus disorder prediction 1 18 - -
Pte12g00638 405 Pfam G-box binding protein MFMR 1 95 IPR012900 -
Pte12g00638 405 MobiDBLite consensus disorder prediction 365 405 - -
Pte12g00638 405 MobiDBLite consensus disorder prediction 301 324 - -
Pte12g00638 405 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 303 366 IPR004827 GO:0003700|GO:0006355
Pte12g00638 405 SMART brlzneu 301 365 IPR004827 GO:0003700|GO:0006355
Pte12g00638 405 MobiDBLite consensus disorder prediction 1 35 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte12g00638 Pte-Chr12 6047561 6052088 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte12g00638 1 374 bZIP Transcription Factor Family AT2G35530 61.979 3.05e-156 445
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Pte12g00638 MFMR_assoc 6.2e-53 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte12g00638 K09060 - vvi:100243644 582.408
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte12g00638 12 6047561 6052088 Pte12g00638 12 6047561 6052088 RCT