Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte12g00630 ATGGCAGTGTGTACAGTCTATAGTACAACACAGTATATCAACACCAGTTGTTCTATCTCCACCCCATCAAAAACTCATCTGGGATTTCATCAAAAGCAGCTAGTTTTCTTTTCTACTGGGAAGAGAAATGGCAAGAGAGGCAGTGGTAGTGCTAGTACCCCATGTGTGATAACATGTGCAGCAGGTGACTCACAGACAGTGGTGATTGGTCTTGCAGCTGACTCTGGTTGTGGGAAGAGTACCTTCATGAGAAGGCTTACCAGTGTGTTCGGAGGAGCAGCAGAACCACCTAAGGGTGGCAACCCTGACTCCAACACCTTAATCAGTGACACTACAACAGTTATATGTTTGGACGATTATCATTCATTGGATAGGACAGGAAGAAAGGAAAAGGGTGTCACTGCACTTGACCCCAGAGCCAACGACTTTGATCTCATGTATGAACAAGTGAAGGCTATCAAGGAAGGTGTTCCTGTTGAGAAGCCAATATATAATCACGTCAGTGGTCTCTTAGATCCTCCAGAAACCATTAAACCTCCAAAAATATTAGTCATCGAAGGTTTGCACCCAATGTATGATGCTCGCGTGAGGGACCTCTTGGACTTCAGTATCTACTTGGACATCAGCAACGAGGTCAAATTCGCATGGAAGATTCAGCGGGACATGGCAGAACGTGGCCACAGTCTTGAAAGCATCAAAGCTAGTATTGAAGCTAGAAAGCCTGATTTTGACGCTTACATTGACCCTCAAAAGCAATATGCAGATGCAGTAATAGAAGTGTTGCCAACACAACTCATTCCTGATGATGAGGGAAAGATTTTGAGAGTCAGGTTAATCATGAAAGAAGGGGTCAAGTATTTTAACCCTGTTTACTTGTTTGATGAAGGCTCCACCATTTCTTGGATACCTTGTGGAAGAAAGCTTACATGCTCCTACCCTGGCATTAAATTCTCGTATGGACCAGACACCTACTTTGGCAGTGAGGTGTCGGTTTTGGAGATGGACGGACAATTTGACAGATTAGATGAGTTGATATACGTTGAGAGCCATCTAAGCAACATCTCTACCAAATTTTACGGGGAGGTCACACAGCAAATGTTGAAGCACTCTGACTTCCCTGGCAGTAACAATGGAACAGGTCTTTTCCAAACCATAGTTGGGTTGAAGATAAGAGACCTCTATGAGCAGATAGTAGCCAGCAGAGCTTCCTCCCCAGTTGGAGCCAAGGCTTGA 1233 0.4453 MAVCTVYSTTQYINTSCSISTPSKTHLGFHQKQLVFFSTGKRNGKRGSGSASTPCVITCAAGDSQTVVIGLAADSGCGKSTFMRRLTSVFGGAAEPPKGGNPDSNTLISDTTTVICLDDYHSLDRTGRKEKGVTALDPRANDFDLMYEQVKAIKEGVPVEKPIYNHVSGLLDPPETIKPPKILVIEGLHPMYDARVRDLLDFSIYLDISNEVKFAWKIQRDMAERGHSLESIKASIEARKPDFDAYIDPQKQYADAVIEVLPTQLIPDDEGKILRVRLIMKEGVKYFNPVYLFDEGSTISWIPCGRKLTCSYPGIKFSYGPDTYFGSEVSVLEMDGQFDRLDELIYVESHLSNISTKFYGEVTQQMLKHSDFPGSNNGTGLFQTIVGLKIRDLYEQIVASRASSPVGAKA* 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte12g00630 410 CDD PRK 68 356 - -
Pte12g00630 410 FunFam Phosphoribulokinase 63 292 - -
Pte12g00630 410 PANTHER URIDINE KINASE 66 307 - -
Pte12g00630 410 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 65 336 IPR027417 -
Pte12g00630 410 ProSitePatterns Phosphoribulokinase signature. 217 230 IPR006082 GO:0005524|GO:0005975|GO:0008974
Pte12g00630 410 Pfam Phosphoribulokinase / Uridine kinase family 68 266 IPR006083 GO:0005524|GO:0016301
Pte12g00630 410 PRINTS Phosphoribulokinase family signature 217 234 IPR006082 GO:0005524|GO:0005975|GO:0008974
Pte12g00630 410 PRINTS Phosphoribulokinase family signature 182 200 IPR006082 GO:0005524|GO:0005975|GO:0008974
Pte12g00630 410 PRINTS Phosphoribulokinase family signature 235 258 IPR006082 GO:0005524|GO:0005975|GO:0008974
Pte12g00630 410 PRINTS Phosphoribulokinase family signature 73 90 IPR006082 GO:0005524|GO:0005975|GO:0008974
Pte12g00630 410 Gene3D - 63 300 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte12g00630 Pte-Chr12 5897339 5902537 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte12g00630 120 258 PRT Gene Family AT3G27440 29.577 8.58e-17 80.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte12g00630 K00855 - qsa:O6P43_033385 748.429