Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte12g00629 ATGGGAAGATATGTAAAAGGAAACCCTGTCATACCTGAAGCTGACCCAGGGAGACCTCTTTCACATATTTCTTGGTTTTATCCTGGATGTGGTCAATCTGGAAAACCCTTTCCAAACCAGTCTCAAGGAAGTAAAATGAATCAGACACCCGGCCTAGCCGTTTCTCCTTTACGTTCCATAGCTCCTAAGATTGAGTCATCTAAGACAGTTGATCCAAAAACCAAACACGCAAAAGCTAACAAACAGAAGTCTAAAGTGAAAGAATCTGATCGACTTGCACCAAAGGTTGTTAGACCAAAACAAACAAAGCAGAGCCAAAGGAAGACAAAGACAAAGGGACAAAGTAAATCTGAAGGAAAACGTGAAAGAAAAGATCTGAATGTTGATTCGGATGTAAGAAACTTCGATTTATGTATGTTGCCTTCGCCATATTGTTCTTGTACAGGTGTTGCTAGGATGTGCTACAAGTGGGGTACTGGTGGATGGCAGTCCTCTTGTTGCACCCCTAACATTTCTGAGTATCCCTTGCCAATGAGTTGCACCAGACCTGGTGTTCGCATGGCTGGTAGGAAGATGAGCAATGGAGCTTATGGGAAGCTTCTGGTGAAACTTTCAAGTGAAGGTCATGATCTTAACCATGCAATTGACCTGAAAAGCCATTGGTCAAGGCATGGCACTAACAAGTTTGTCACTATCAAGTAG 702 0.4274 MGRYVKGNPVIPEADPGRPLSHISWFYPGCGQSGKPFPNQSQGSKMNQTPGLAVSPLRSIAPKIESSKTVDPKTKHAKANKQKSKVKESDRLAPKVVRPKQTKQSQRKTKTKGQSKSEGKRERKDLNVDSDVRNFDLCMLPSPYCSCTGVARMCYKWGTGGWQSSCCTPNISEYPLPMSCTRPGVRMAGRKMSNGAYGKLLVKLSSEGHDLNHAIDLKSHWSRHGTNKFVTIK* 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte12g00629 233 MobiDBLite consensus disorder prediction 68 97 - -
Pte12g00629 233 MobiDBLite consensus disorder prediction 111 127 - -
Pte12g00629 233 SMART GAGA_bind_2 1 233 IPR010409 -
Pte12g00629 233 Pfam GAGA binding protein-like family 63 233 IPR010409 -
Pte12g00629 233 MobiDBLite consensus disorder prediction 30 127 - -
Pte12g00629 233 PANTHER - 69 233 IPR010409 -
Pte12g00629 233 MobiDBLite consensus disorder prediction 34 54 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte12g00629 Pte-Chr12 5897263 5899993 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte12g00629 40 234 BBR or BPC Transcription factor family AT2G35550 51.010 2.35e-62 192
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BBR-BPC Pte12g00629 GAGA_bind 2.2e-61 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte12g00629 - - qsu:112037379 281.567