Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte12g00616 ATGGAGAGGTATAAGTTGATCGAGGAAGTTGGTGATGGTACGTTTGGAAGTGTATGGAGAGCCTTAAATAAGCAAACTGGTGAAGTCGTTGCAATCAAAAAGATGAAGAAGAAGTATTACTCCTGGGAGGAATGTGTAAATTTGAGAGAAGTCAAGTCACTGAGGAAGATGAGTCATCCCAATATCGTAAAACTAAAGGAAGTGATTAGAGAAAATGACATCCTGTACTTCGTTTTTGAGTATATGGCGTGCAACTTATACCAGCTCATGAAAGACAGAGTAAAGCCTTTTTCTGAACCTGAAATTAGGAATTGGTGTTTTCAAGTTTTTCAAGGTCTAGCTTACGTGCATCAGCGTGGGTACTTTCATCGTGACCTTAAGCCAGAGAACTTGTTAGTCACGAAGGAGATTATCAAAATCGCAGATTTTGGTCTTGCTCGAGAAATCAATTCACATCCACCGTATACTGAGTACGTTTCAACACGATGGTACCGTGCACCTGAAGTGCTACTACAGTCTTATATGTATACCTCCAAAGTGGATATGTGGGCAATGGGCGCTATCATGGCTGAGCTGTTTTCCCTTCGTCCTCTTTTTCCTGGAGTGAGTGAAGCAGATGAAATCTACAAAATATGCAGTGTGATTGGCAGTCCTACAAATGAATCATGGGCAGATGGACCTTCTCTTGCAAGGGATATCAACTACCAATTTCCACAGCTTGCTGGTTTACATCTATCTGTATTAATTCCCTCAGCGAGTAGCAATGCTATTAGCCTTATCACATCACTTTGTTCTTGGGATCCATCCAAGAGGCCTACTGCTGGTGAGGTCCTTCAGCATCCTTTTTTTCAGACTTGCTTTTATGTTCCTCCATCACTTCGTCCAAGAGTAGCAGTTAACAGAACTCCTCCATCTGGTGGAATGAAGGTCTCATTTGATCAAAATGCTGTTAAGAGATACCCTGATGCACTATCTAGTGACAAGCACGGCAACAACTTCCCTTCTTCAAAGTCACATTCTTCTCTTGGTGCAGGTGTGCAACGCAAGCTGGATATGATTAATAGGGATGTGAACAAGGGCGACAAGTTGACGAAGACCGCTCAGCAACAACAACCCAAATATCGACCACCTGTGAATAGCAGTATATTGAACAAGGGGAGGAAGGTGCGTGGAGTTTCAGAAACGGTTGATAAATTGGCAAACCTAGCTGTTGATTCTCCCAAGCCATCTATTTTGCCTATGAAGGCTGGGGTCCGCTGGACATCTGACTCTGGCAATTTGTTGCTCCGATCCCAAGAGATCCATTCAGGCAGAAGCTACAGTAGGAAGGTCGCAGGATGA 1341 0.434 MERYKLIEEVGDGTFGSVWRALNKQTGEVVAIKKMKKKYYSWEECVNLREVKSLRKMSHPNIVKLKEVIRENDILYFVFEYMACNLYQLMKDRVKPFSEPEIRNWCFQVFQGLAYVHQRGYFHRDLKPENLLVTKEIIKIADFGLAREINSHPPYTEYVSTRWYRAPEVLLQSYMYTSKVDMWAMGAIMAELFSLRPLFPGVSEADEIYKICSVIGSPTNESWADGPSLARDINYQFPQLAGLHLSVLIPSASSNAISLITSLCSWDPSKRPTAGEVLQHPFFQTCFYVPPSLRPRVAVNRTPPSGGMKVSFDQNAVKRYPDALSSDKHGNNFPSSKSHSSLGAGVQRKLDMINRDVNKGDKLTKTAQQQQPKYRPPVNSSILNKGRKVRGVSETVDKLANLAVDSPKPSILPMKAGVRWTSDSGNLLLRSQEIHSGRSYSRKVAG* 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte12g00616 446 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 3 334 - -
Pte12g00616 446 ProSitePatterns Protein kinases ATP-binding region signature. 10 34 IPR017441 GO:0005524
Pte12g00616 446 SMART serkin_6 4 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte12g00616 446 FunFam serine/threonine-protein kinase MAK isoform X1 84 293 - -
Pte12g00616 446 MobiDBLite consensus disorder prediction 361 382 - -
Pte12g00616 446 SUPERFAMILY Protein kinase-like (PK-like) 1 287 IPR011009 -
Pte12g00616 446 MobiDBLite consensus disorder prediction 322 347 - -
Pte12g00616 446 ProSitePatterns Serine/Threonine protein kinases active-site signature. 121 133 IPR008271 GO:0004672|GO:0006468
Pte12g00616 446 MobiDBLite consensus disorder prediction 363 378 - -
Pte12g00616 446 Pfam Protein kinase domain 4 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte12g00616 446 MobiDBLite consensus disorder prediction 328 343 - -
Pte12g00616 446 FunFam cyclin-dependent kinase F-4-like 1 83 - -
Pte12g00616 446 CDD STKc_MAK_like 4 283 - -
Pte12g00616 446 Gene3D Transferase(Phosphotransferase) domain 1 84 288 - -
Pte12g00616 446 Gene3D Phosphorylase Kinase; domain 1 1 83 - -
Pte12g00616 446 ProSiteProfiles Protein kinase domain profile. 4 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte12g00616 Pte-Chr12 5587949 5591513 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte12g00616 1 290 Core Cell Cycle Gene Families AT3G48750 37.919 1.91e-67 215
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_RCK Pte12g00616 Pkinase 9.2e-76 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte12g00616 K08829 - qsu:112020153 680.633