Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pte12g00604 | ATGGGCATTTGTCTGATGAAATGGAAATGGCCATGGCTGCTTTTCATTCAGCTGCTTTGTTTTATGATCATAAGAAGTGGAGCTCTTAGTCCTGATGGTGAGGCACTTCTTAGCTTCAGGATGAGTATTGTTAACTCAGACGACCTCCTTTTGAAGTGGAGGCCTGAAGACCCCAACCCTTGCAATTGGAAAGGAGTGATTTGTGATCTCAAAACCAAGAGAGTGATACATTTGAACTTATCTCGCCACAAGTTAAGTGGATCGATATCACCTGACCTTGGGAAGCTTGACCAACTGAAGATTTTATCTCTCCACAACAACAATATCTATGGAATGATACCATCTGAGTTGGGAAATTGCAGTCAGTTACAGGGAATATTCTTGCAGGGTAACTACCTCAGTGGACAGATACCAAGTGAGATGGGAAAGCTTTCAGAGCTTCAAAATTTTGATCTGTCAAGCAACTCTCTAAGTGGTAACATTCCCCTATCCCTTGGAAATTTGTCCAAGCTTATCTTGTTCAATGTGTCAGCTAATTTTCTGATCGGTCCTATACCATCTGATGGAGTTCTTGCCAATTTCAATCAGAGCTCATTTGTTGGAAATCGTGGTTTATGTGGCAAACAAATCAATCTTATGTGCAAAGATGATGGTTCTCCTGCCAATTCCTCATCTCCTATATCAGACCAAAATGCAAATGCAAAGAAGAAATATTCTGGCAGGCTTTTTATCAGTGCATCAGCAACTGTTGGTGCACTACTATTGGTGGCGCTCATGTGTTTTTGGGGTTGCTTCCTTTACAAGAGGTTTGGCAAAAATGGCACCACAAGTTTGGCAATGGACGTTGGTGGAGGTGCATCAATTGTTATGTTTCATGGTGATTTGCCATACTCTTCAAAGGATATTATCAAGAAGTTAGAGACTTTGAATGAGGAACACATAATAGGTTGTGGTGGATTTGGTACGGTTTACAAGCTTGCAATGGATGATGGCAATGTCTTTGCATTAAAAAGAATTGTAAAAATGAACGAGGGCTTTGATAGATTTTTTGAGAGGGAGCTTGAAATTCTTGGAAGCATAAAACATCGCTATTTGGTGAATTTACGAGGGTATTGCAATTCTCCTACATCAAAGTTGTTGATATATGATTTCCTACCTGGTGGCAGCCTTGATGAAGCTCTTCATGAAAGATCTGAGCAGCTAGATTGGGATGCACGTCTGAATATAATCATGGGAGCAGCAAAAGGGCTGTCTTACTTGCATCATGATTGTTCCCCAAGAATTATACACCGTGACATAAAATCAAGCAATATTTTGCTCGACGGCAATTTGGATGCCCGTGTTTCTGACTTTGGACTTGCCAAACTGCTAGAAGATGAAGAGTCTCATATTACGACTATTGTTGCTGGAACATTTGGTTACCTTGCTCCAGAATACATGCAAAGTGGTAGAGCAACTGAAAAGACAGATGTATATAGTTTTGGGGTCCTGGTGCTTGAGGTGATGAGCGGGAAGCGACCAACAGATGCATCGTTCATTGAGAAGGGTCTCAACATTGTCGGCTGGTTAAACTTTTTAGTTACAGAAAATAGACAGCGAGAAATTGTTGATCCCCAGTGTGAGGGCGTCCAGGAAGAAAGCCTCGATGCGTTGCTTTCGGTTGCCATCCAGTGCGTGTCTTCAGCTCCAGAGGATCGACCCACCATGCACAGGGTTGTCCAGTTACTTGAGTCAGAGGTTATGACCCCATGCCCGAGTGATTTTTATGATTCTAACTCGGAGTAA | 1785 | 0.4207 | MGICLMKWKWPWLLFIQLLCFMIIRSGALSPDGEALLSFRMSIVNSDDLLLKWRPEDPNPCNWKGVICDLKTKRVIHLNLSRHKLSGSISPDLGKLDQLKILSLHNNNIYGMIPSELGNCSQLQGIFLQGNYLSGQIPSEMGKLSELQNFDLSSNSLSGNIPLSLGNLSKLILFNVSANFLIGPIPSDGVLANFNQSSFVGNRGLCGKQINLMCKDDGSPANSSSPISDQNANAKKKYSGRLFISASATVGALLLVALMCFWGCFLYKRFGKNGTTSLAMDVGGGASIVMFHGDLPYSSKDIIKKLETLNEEHIIGCGGFGTVYKLAMDDGNVFALKRIVKMNEGFDRFFERELEILGSIKHRYLVNLRGYCNSPTSKLLIYDFLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLSYLHHDCSPRIIHRDIKSSNILLDGNLDARVSDFGLAKLLEDEESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVMSGKRPTDASFIEKGLNIVGWLNFLVTENRQREIVDPQCEGVQEESLDALLSVAIQCVSSAPEDRPTMHRVVQLLESEVMTPCPSDFYDSNSE* | 595 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pte12g00604 | 594 | Gene3D | Transferase(Phosphotransferase) domain 1 | 385 | 583 | - | - | |
Pte12g00604 | 594 | Pfam | Protein kinase domain | 311 | 574 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Pte12g00604 | 594 | SUPERFAMILY | L domain-like | 30 | 195 | - | - | |
Pte12g00604 | 594 | Pfam | Leucine rich repeat N-terminal domain | 30 | 69 | IPR013210 | - | |
Pte12g00604 | 594 | SMART | serkin_6 | 309 | 581 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Pte12g00604 | 594 | SUPERFAMILY | Protein kinase-like (PK-like) | 294 | 576 | IPR011009 | - | |
Pte12g00604 | 594 | FunFam | LRR receptor-like serine/threonine-protein kinase FEI 1 | 283 | 384 | - | - | |
Pte12g00604 | 594 | Gene3D | Ribonuclease Inhibitor | 30 | 215 | IPR032675 | - | |
Pte12g00604 | 594 | ProSitePatterns | Protein kinases ATP-binding region signature. | 315 | 341 | IPR017441 | GO:0005524 | |
Pte12g00604 | 594 | ProSiteProfiles | Protein kinase domain profile. | 309 | 581 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Pte12g00604 | 594 | Gene3D | Phosphorylase Kinase; domain 1 | 285 | 384 | - | - | |
Pte12g00604 | 594 | PANTHER | LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 | 74 | 577 | - | - | |
Pte12g00604 | 594 | FunFam | LRR receptor-like serine/threonine-protein kinase ERECTA | 29 | 191 | - | - | |
Pte12g00604 | 594 | FunFam | LRR receptor-like serine/threonine-protein kinase IOS1 | 385 | 587 | - | - | |
Pte12g00604 | 594 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 428 | 440 | IPR008271 | GO:0004672|GO:0006468 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pte12g00604 | Pte-Chr12 | 5465895 | 5473359 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pte12g00604 | 1 | 585 | Receptor kinase-like Gene Family | AT2G35620 | 75.214 | 0.0 | 895 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRR-XIIIa | Pte12g00604 | Pkinase | 3.9e-46 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pte12g00604 | - | - | qsa:O6P43_033435 | 1028.85 |