Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte12g00604 ATGGGCATTTGTCTGATGAAATGGAAATGGCCATGGCTGCTTTTCATTCAGCTGCTTTGTTTTATGATCATAAGAAGTGGAGCTCTTAGTCCTGATGGTGAGGCACTTCTTAGCTTCAGGATGAGTATTGTTAACTCAGACGACCTCCTTTTGAAGTGGAGGCCTGAAGACCCCAACCCTTGCAATTGGAAAGGAGTGATTTGTGATCTCAAAACCAAGAGAGTGATACATTTGAACTTATCTCGCCACAAGTTAAGTGGATCGATATCACCTGACCTTGGGAAGCTTGACCAACTGAAGATTTTATCTCTCCACAACAACAATATCTATGGAATGATACCATCTGAGTTGGGAAATTGCAGTCAGTTACAGGGAATATTCTTGCAGGGTAACTACCTCAGTGGACAGATACCAAGTGAGATGGGAAAGCTTTCAGAGCTTCAAAATTTTGATCTGTCAAGCAACTCTCTAAGTGGTAACATTCCCCTATCCCTTGGAAATTTGTCCAAGCTTATCTTGTTCAATGTGTCAGCTAATTTTCTGATCGGTCCTATACCATCTGATGGAGTTCTTGCCAATTTCAATCAGAGCTCATTTGTTGGAAATCGTGGTTTATGTGGCAAACAAATCAATCTTATGTGCAAAGATGATGGTTCTCCTGCCAATTCCTCATCTCCTATATCAGACCAAAATGCAAATGCAAAGAAGAAATATTCTGGCAGGCTTTTTATCAGTGCATCAGCAACTGTTGGTGCACTACTATTGGTGGCGCTCATGTGTTTTTGGGGTTGCTTCCTTTACAAGAGGTTTGGCAAAAATGGCACCACAAGTTTGGCAATGGACGTTGGTGGAGGTGCATCAATTGTTATGTTTCATGGTGATTTGCCATACTCTTCAAAGGATATTATCAAGAAGTTAGAGACTTTGAATGAGGAACACATAATAGGTTGTGGTGGATTTGGTACGGTTTACAAGCTTGCAATGGATGATGGCAATGTCTTTGCATTAAAAAGAATTGTAAAAATGAACGAGGGCTTTGATAGATTTTTTGAGAGGGAGCTTGAAATTCTTGGAAGCATAAAACATCGCTATTTGGTGAATTTACGAGGGTATTGCAATTCTCCTACATCAAAGTTGTTGATATATGATTTCCTACCTGGTGGCAGCCTTGATGAAGCTCTTCATGAAAGATCTGAGCAGCTAGATTGGGATGCACGTCTGAATATAATCATGGGAGCAGCAAAAGGGCTGTCTTACTTGCATCATGATTGTTCCCCAAGAATTATACACCGTGACATAAAATCAAGCAATATTTTGCTCGACGGCAATTTGGATGCCCGTGTTTCTGACTTTGGACTTGCCAAACTGCTAGAAGATGAAGAGTCTCATATTACGACTATTGTTGCTGGAACATTTGGTTACCTTGCTCCAGAATACATGCAAAGTGGTAGAGCAACTGAAAAGACAGATGTATATAGTTTTGGGGTCCTGGTGCTTGAGGTGATGAGCGGGAAGCGACCAACAGATGCATCGTTCATTGAGAAGGGTCTCAACATTGTCGGCTGGTTAAACTTTTTAGTTACAGAAAATAGACAGCGAGAAATTGTTGATCCCCAGTGTGAGGGCGTCCAGGAAGAAAGCCTCGATGCGTTGCTTTCGGTTGCCATCCAGTGCGTGTCTTCAGCTCCAGAGGATCGACCCACCATGCACAGGGTTGTCCAGTTACTTGAGTCAGAGGTTATGACCCCATGCCCGAGTGATTTTTATGATTCTAACTCGGAGTAA 1785 0.4207 MGICLMKWKWPWLLFIQLLCFMIIRSGALSPDGEALLSFRMSIVNSDDLLLKWRPEDPNPCNWKGVICDLKTKRVIHLNLSRHKLSGSISPDLGKLDQLKILSLHNNNIYGMIPSELGNCSQLQGIFLQGNYLSGQIPSEMGKLSELQNFDLSSNSLSGNIPLSLGNLSKLILFNVSANFLIGPIPSDGVLANFNQSSFVGNRGLCGKQINLMCKDDGSPANSSSPISDQNANAKKKYSGRLFISASATVGALLLVALMCFWGCFLYKRFGKNGTTSLAMDVGGGASIVMFHGDLPYSSKDIIKKLETLNEEHIIGCGGFGTVYKLAMDDGNVFALKRIVKMNEGFDRFFERELEILGSIKHRYLVNLRGYCNSPTSKLLIYDFLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLSYLHHDCSPRIIHRDIKSSNILLDGNLDARVSDFGLAKLLEDEESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVMSGKRPTDASFIEKGLNIVGWLNFLVTENRQREIVDPQCEGVQEESLDALLSVAIQCVSSAPEDRPTMHRVVQLLESEVMTPCPSDFYDSNSE* 595
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte12g00604 594 Gene3D Transferase(Phosphotransferase) domain 1 385 583 - -
Pte12g00604 594 Pfam Protein kinase domain 311 574 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte12g00604 594 SUPERFAMILY L domain-like 30 195 - -
Pte12g00604 594 Pfam Leucine rich repeat N-terminal domain 30 69 IPR013210 -
Pte12g00604 594 SMART serkin_6 309 581 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte12g00604 594 SUPERFAMILY Protein kinase-like (PK-like) 294 576 IPR011009 -
Pte12g00604 594 FunFam LRR receptor-like serine/threonine-protein kinase FEI 1 283 384 - -
Pte12g00604 594 Gene3D Ribonuclease Inhibitor 30 215 IPR032675 -
Pte12g00604 594 ProSitePatterns Protein kinases ATP-binding region signature. 315 341 IPR017441 GO:0005524
Pte12g00604 594 ProSiteProfiles Protein kinase domain profile. 309 581 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte12g00604 594 Gene3D Phosphorylase Kinase; domain 1 285 384 - -
Pte12g00604 594 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 74 577 - -
Pte12g00604 594 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 29 191 - -
Pte12g00604 594 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 385 587 - -
Pte12g00604 594 ProSitePatterns Serine/Threonine protein kinases active-site signature. 428 440 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte12g00604 Pte-Chr12 5465895 5473359 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte12g00604 1 585 Receptor kinase-like Gene Family AT2G35620 75.214 0.0 895
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIIIa Pte12g00604 Pkinase 3.9e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte12g00604 - - qsa:O6P43_033435 1028.85