Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte12g00598 ATGATTTCTGGTTATGTAGCAAGCTTTCCTAGTTCAGGTTATGTGATTTTATTTTTAGTTCTTGATATGATTTCTGGTGTCAAGTTGATTGCGTGCTCGTCAGTGATATTTCTGCTTCCTGTTCTCTTGTTAGTTAGTTCCTTTAAAATAATAATCAAATGTTGCTTGAATTATTTCTGCAGCATGTTGGGTCCACGACCAGAACATTGGTTAATTCTTGGTGTGTGTTTAGTGCTCTTGCTGAAAACACGGGGCTTTTTGGTTGATATAACTTACGTTGAGAACGCTGTGGCAAAAGGGGCTGTTTGCTTAGATGGAAGCCCACCAGCTTACCACTTTGATAAGGGATTTGGAGCAGGAGTCAATAATTGGTTAATTCACTTTGAGGGAGGAGGATGGTGCAACAACGTCACCACTTGCCTGGCCCGCAAGAACACTCGTTTAGGTTCATCTAAGCAAATGGTCAAGCAAATTGCTTTCTCTGGACTTTTAAGTAACAAGCCACAATTTAATCCAGATTTCTATAACTGGAATAGAATCAAGGTTAGATACTGTGATGGATCATCATTTACTGGTGATGTTGAAGCTGTCAATCCTGCTACTAATCTCCACTTCAGAGGGGCTAGGGTCTTTGTTGCTGTCATTGAGGATTTGTTAGCCAAAGGTTTTAAAAATGCTGAAAATGCTATTCTTTCTGGTTGCTCCGCTGGTGGATTGACTTCCATTTTGCATTGTGATAAATTCCGAGCACTGGTTCCGACGGGTGCTAAAGTGAAATGCCTTTCAGATGCTGGTTATTTCATTAATACAAAAGATGTCTCTGGAACATCTCATATTGAAGCGTTCTACAGCGAAGTGGTTGCAACCCATGGTTCAGCAAAGAATTTGCCTCCTTCCTGCACTGCAAAATTGAGTTCCGGCCTCTGCTTTTTCCCTCAATATTCTGCACCCGAGATCCGAACGCCAATATTCTTCGTAAATGCAGCTTATGACTCATGGCAGATAAAGAACATTTTGGCACCAGGTGTTGCTGATCCACACGGGCTTTGGCACAGCTGCAAACTTGACATAACAAAGTGCTCTTCAAGTCAACTGACCACCATGCAAGGTTTCAGAACGGAGTTCTTAAGGGCAGTGAGTGCTTTGGAAAACTCTCCATCCAAAGGATTCTTCTTAGATGGTTGCTATGCTCACTGCCAAACAGAAATGCAGGAAACATGGTTAAGAAGTGATTCTCCAGTGCTGGCTAATAAGACCATTGCAAAAGCAGTTGGAGACTGGTTCTATGATCGAAGTCCCTTCCAGAAGATCGACTGCGCGTACCCTTGCAACCCCACGTGCCACAACCGTGTTTTCGAACCTTCACAAGAACATCCAGGAGTATAG 1386 0.4271 MISGYVASFPSSGYVILFLVLDMISGVKLIACSSVIFLLPVLLLVSSFKIIIKCCLNYFCSMLGPRPEHWLILGVCLVLLLKTRGFLVDITYVENAVAKGAVCLDGSPPAYHFDKGFGAGVNNWLIHFEGGGWCNNVTTCLARKNTRLGSSKQMVKQIAFSGLLSNKPQFNPDFYNWNRIKVRYCDGSSFTGDVEAVNPATNLHFRGARVFVAVIEDLLAKGFKNAENAILSGCSAGGLTSILHCDKFRALVPTGAKVKCLSDAGYFINTKDVSGTSHIEAFYSEVVATHGSAKNLPPSCTAKLSSGLCFFPQYSAPEIRTPIFFVNAAYDSWQIKNILAPGVADPHGLWHSCKLDITKCSSSQLTTMQGFRTEFLRAVSALENSPSKGFFLDGCYAHCQTEMQETWLRSDSPVLANKTIAKAVGDWFYDRSPFQKIDCAYPCNPTCHNRVFEPSQEHPGV* 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte12g00598 461 PANTHER NOTUM-RELATED 77 449 IPR004963 GO:0016787
Pte12g00598 461 Pfam Pectinacetylesterase 82 433 IPR004963 GO:0016787
Pte12g00598 461 SUPERFAMILY alpha/beta-Hydrolases 202 333 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte12g00598 Pte-Chr12 5392304 5397925 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte12g00598 68 459 Carbohydrate Esterase AT4G19420 62.529 0.0 577
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte12g00598 K19882 - qsa:O6P43_033444 682.945
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte12g00598 12 5392304 5397925 Pte12g00598 12 5392304 5397925 RCT