Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte12g00586 ATGACGGTGTCGTTTCTGGGTTCGTTGGCCAATGTCAATGAAGATATACGTAAAGCCCATATGTCTATGGCCTTCGTTCAGCTTTTTGCTGGAGGTTACCATGTCATCACCAAAGTGGCACTAAATGTTGGTGTCAACCAATTGGTCTTCTGTGTCTTCCGGGATCTCATAGCTCTTGCTATTCTTGCCCCCGTCGCTTATGTTCGTGAAAAACGGACTAGACCACCTATTAGCAGGCGCCTCCTCGCATCATTCTTCTTGCTTGGATTGACAGGGATATTTAGCAACCAGCTTTTGTTCCTTATTGGTCTAGGCTATACAAACCCAACATATGCGGCTGCCATACAGCCTGCCATACCAGTCTTTACATTTATTTTGGCTGTAATTATGGGCACAGAAAAGGTGCACTTATTCAGAGCTGATGGTCGGGCAAAAGTTCTAGGAACTCTTATCTGTGTATCTGGTGCCTTGTTGATGGTTCTATATCGAGGTCCAGCATTGTTTGGGAATTCTGAAATGGACTTTGTATCACAGAGTGAAATAAGTGCCAGAGGTCAACCTGAGCCTTCTGGGTGGCTCGTGAGTAGTTTCATGGATATTGGGTTTGACAATTTTCACCTTGGGGTTTTGTGCTTGATAGGAAACTGCATTTGTATGTCCGCTTTTCTATCTATTCAGGCTCGTGTGTTAAAACAGTATCCTGCCAACTTATCTCTTACAGCATATTCCTATCTTTTTGGAGCTGCATTTATGGTGTTCACTGCTTCCTTGCTGACAGCTGAGGCAAAAGACTGGATTTTGACACAATCTGAACTGTTCGCTGTCATTTATGCTGGCACTGTTGCATCTGCCCTTAACTACGGACTATTGACATGGGCTAACAAAATCTTGGGGCCTGCTATGGTTGCACTTTACTATCCTCTTCAGACTGTTGCGTCTGCGTGCTTGTCACGAATTTTCATTGGAAGTACAATATATATTGGAAGTGTTCTAGGAGGAAGTTTGATCATTGGTGGTCTGTACTTGGTGACTTGGGCATCGTATACTGAAAGGCAATCAACCTTTGGAGTCAGCCCTCAAGTTTTACGGGTTTCTGAGTCATCTATACGCAGGGACTCTCCAATTCACAAGTCTTCATAG 1140 0.4404 MTVSFLGSLANVNEDIRKAHMSMAFVQLFAGGYHVITKVALNVGVNQLVFCVFRDLIALAILAPVAYVREKRTRPPISRRLLASFFLLGLTGIFSNQLLFLIGLGYTNPTYAAAIQPAIPVFTFILAVIMGTEKVHLFRADGRAKVLGTLICVSGALLMVLYRGPALFGNSEMDFVSQSEISARGQPEPSGWLVSSFMDIGFDNFHLGVLCLIGNCICMSAFLSIQARVLKQYPANLSLTAYSYLFGAAFMVFTASLLTAEAKDWILTQSELFAVIYAGTVASALNYGLLTWANKILGPAMVALYYPLQTVASACLSRIFIGSTIYIGSVLGGSLIIGGLYLVTWASYTERQSTFGVSPQVLRVSESSIRRDSPIHKSS* 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte12g00586 379 SUPERFAMILY Multidrug resistance efflux transporter EmrE 54 163 - -
Pte12g00586 379 Pfam EamA-like transporter family 22 160 IPR000620 GO:0016020
Pte12g00586 379 Pfam EamA-like transporter family 207 344 IPR000620 GO:0016020
Pte12g00586 379 PANTHER WAT1-RELATED PROTEIN 21 351 IPR030184 GO:0016020|GO:0022857
Pte12g00586 379 SUPERFAMILY Multidrug resistance efflux transporter EmrE 256 348 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte12g00586 Pte-Chr12 5242293 5247016 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte12g00586 102 373 Nodulin-like Gene Family AT5G45370 64.130 8.19e-123 354
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte12g00586 - - fve:101303185 535.413