Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte12g00580 ATGACACAAACCGTAAGGACACACCGGCCTTCCTTTAGCTCCAGCAGTGGCATTGAGGATACACCTCAGCAGAATTCAGCTGGCTTTAGCAATAGTGATGAGTATGACAGTGATAGCTCAAATTTTGCACCACCCACGCCCTCAATTCTACCAATGGCTATCCCTGCAGAACTTTCTGGTGCCATACCCTTGATGGACAGATTCCAGGTGGAAGGATTTCTAAGGTTAATGCATAAACAAATTCAATCAGCTGGAAAACGAGGTTTTTTTTCTAAAAAATCTATAAGCCCACAGGTTCAAGAGAAGTTCACTTTTGAAGATATGCTTTGTTTTCAAAAGGATCCAATACCAACTTCTTTGCTTAAATTAAATGGTGATTTGGCAAGCCGATCCATCAAATTATTCCAGATAATTTTGAAATATATGGGAGTTGATTCATCTGATAGCGAGGTTCCAATCAGCTTGGATGAACGAGTTGAGCTTGTTGGGAAATTGTACAAGCAAACTTTGAAACGTTCTGAGCTCAGGGATGAACTTTTTGTTCAGATATCAAAGCAAACCAGAAACAATCCAGAGAGCAGGCAATTCTTGGTTAAAGCATGGGAGCTCATGTATCTATGTGCATCATCTATGCCTCCCAGTAAGGACATTGGTGCTTATCTATCAGAATATGTGCATAATGTAGCACACAGTGTGAATACTGAATCAGAGATCCGTGCTCTAGCTTTAAATACATTAAATGCCTTGAAGAGGTCAGTCAAGGCAGGTCCTAGGCATACGATACCTGGGCGTGAGGAGATTGAGGCACTACTGACTGGTCAGAAGCTCACTACTATTGTGTTCTTCTTGGATGAAACTTTTGAAGAAATTGCATACGACATGGCAACTACTGTTTCTGATGCTATTGAGGAACTTGCAGGGATAATTAAATTGTCAACATACTCCAGTTTTAGTCTATTTGAATGCCACAAAGTTGTTTCTAGCTCAAAAGCAACTGATCCTGGAAATGAGGAGTACGTAGGGATAGATGATAATAAATATATTGGAGATCTCTTGGCAGAATTTAAGGCAGCAAAAGATAGAAGTAAAGGAGAAATTTTGCACTGTAAACTGCTATTCAAGAAAAAGTTATTTCGGGAGTCAGATGAAGCAGTCACAGATCCAATGTTTGTGCAATTATCTTATAGCTGGATCATTTTGTCACAGTTGCAACATGATTATATTTTGGGAAATTATCCAATTGGAAGAGATGATGCTGCGCAACTGTCTGCATTGCAAATTTTGGCTGAGATTGGATTTGTTGCTTCACCTGAATCATGCACTGATTGGAATTCGCTTCTGGAGAGATTCCTTCCAAGACAAATTGCAATTATGCGAGGAAAACGCGAGTGGGAGCTAGACATTTTGTCTCGTTACCATTCCATGGAATATCTAACAAAAGATGATGCAAGACAACAGTTCCTGCGGATACTGAGAGCACTTCCGTATGGAAATTCAGTATTCTTCTGTGTTCGAAAGATTGATGATCCTATTGGCCTCCTGCCTGGACGAATAATATTGGGTATTAATAAGAGAGGGGTTCACTTTTTCCGTCCAGTTCCTAAGGAATATCTCCATTCAGCTGAGTTAAGAGACATAATGCAATTTGGTAGCAGCAATACTGCCGTTTTTTTTAAGATGAGAGTTGCAGGAGTACTTCACATTTTCCAGTTCGAAACCAAGCAGGGTGAAGAAATATGTGTTGCTCTTCAGACTCACATAAATGACGTCATGTTGCGCCGCTATTCAAAAGCACGATCTGCTGCAAGTGGTTCTGCTAATGGGGATTTTCCTCATAATTTGAAGTCCCCCAATGATGAATCATATGAAAGGCGAATTCAGGATTTGTCAAAAGCTATTGAAGAATCTCAAAGGAATGCTGATAAGTTGCTTGACGAATTAAATGAAAAGCAAAAGCAGGAGGCTAAAATGCAGGGAGAATTGAAAGGCTTGAAAGACTCCTTAAAAGTTAATGAACAAGCCTTGGAAAATTTTGCCTGCGAACGAGATAGACTTCAATCTCTATGTGATGGAAAAGAGAAAGAACTTCAGGCTGTAGTTTTAGAGAACAATAGCATCAAAGCAAAGCTAGCGAAGCTGGCCAATGTGGTTGCAGAGCAGGCGACCAAAAAACATGCTGTTGGAGAAAGCAACCTACTTGTGCAAAAACTTCAAGATGAGGTAAAGCTTTGTGACGAGAAATTGCATGAGGCAGAAGAAACAATTAAGAGACTGGAAAATGAAAAATTGTCGTTACAACAGAAAGTTGCTGCACTTGATAAGAAGAAAGTGGAAGAGATGGATTTTCTTCACAAGAACTTTGATGAGGACTTCAAATCCCTGAAGTTCCAGATTCATGACCTTGAAAAAAAGCTTGAGGCAACTAGACAAGATTTAACTGCTTCTGAGGCAGCTGTTGCTGCTAAGGACTCTGAGTTGTCTTCACTGCAGAATAGCTTGAAGGAATTGGAAGAACTAAAAGAAATGAAAGAAGACATTGATAGAAAGAATGAGCAAACAGCTGCTATCTTGAAGATGCAGAGAAATCAGCTAGCTGAGTTGGAAGTGCTTTATAAGGAAGAACAGGTTCAAAGAAAGCGTTACTTCAATATCATAGAAGATATGAAAGGTAAGATCAGAGTTTATTGTCGTCTGAGACCTATGAATGAGAAAGAGGTTGCCGAGAAAGAAAGACAAGTTCTAACCAGTGTGGATGAGTTTACAGTGGAACATCCATGGAAAGATGATAGAGCAAAGCAACACATATATGACCGCGTCTTTGATGGTGATGCCACGCAAGAAGATGTTTTTGAGGACACCAAGTTTTTGGTGCAATCAGCTGTAGACGGATATAATGTCTGCATATTCGCTTATGGTCAAACTGGTTCAGGGAAGACATTTACAATTTATGGATCTGAAAACAACCCTGGTCTTACACCACGAGCTACAGCAGAATTGTTCAAGATTATGAGGAGGGACAAGAACAAATTCTCATTTTCTTTGAAGGCATATATGATGGAAATATATCAAGATACACTCATAGATCTTCTGCTACCAAAAAATGCAAAACATTCAAGATTGGATATCAAGAAAGACTCAAAGGGAATGGTGTCAGTTGAAAATGCGACAATTGTATCAATTTCAACAATTGAGGAGTTGAACAGCATAATTCACAGAGGTTCTGAACGAAGGCATATATCTGAGACACAGATGAATGAAGAAAGTTCAAGATCCCATCTTATACTTTCAATTGTTATTGAAACAACCAACCTCCAAAGCCAATCTGTTTCAAGAGGAAAGCTAAGTTTTGTGGATCTAGCTGGTTCTGAAAGAGTGAAGAAATCAGGCTCCTCAGGCAATCAGCTTAAAGAAGCTCAAAGCATCAATAAATCACTATCTGCACTTGGGGATGTTATCAGTGCTCTGTCTTCTGGTGGTCAACACATACCTTACAGGAATCACAAGCTAACAATGCTAATGAGTGATTCGCTTGGTGGTAATGCCAAAACACTAATGTTTGTCAACGTGTCGCCATCAGAATCAAACTTGGAAGAGTCTTATAACTCCCTCATGTATGCTTCAAGGGTCCGATCTATTGTGAATGATCCAAGCAAGAATGTGTCATCCAAAGAGGTAGCTCGACTGAAGAAATTAGTTGCATATTGGAAGGAGCAAGCAGGCAGAAGAGGGCAGGAAGAAGAATTAGAGGAAATTCAAGATGAGCAGCCAAGAAGGGAGAGGTCCGATGGCCGCCATTCCATGTAG 3804 0.3993 MTQTVRTHRPSFSSSSGIEDTPQQNSAGFSNSDEYDSDSSNFAPPTPSILPMAIPAELSGAIPLMDRFQVEGFLRLMHKQIQSAGKRGFFSKKSISPQVQEKFTFEDMLCFQKDPIPTSLLKLNGDLASRSIKLFQIILKYMGVDSSDSEVPISLDERVELVGKLYKQTLKRSELRDELFVQISKQTRNNPESRQFLVKAWELMYLCASSMPPSKDIGAYLSEYVHNVAHSVNTESEIRALALNTLNALKRSVKAGPRHTIPGREEIEALLTGQKLTTIVFFLDETFEEIAYDMATTVSDAIEELAGIIKLSTYSSFSLFECHKVVSSSKATDPGNEEYVGIDDNKYIGDLLAEFKAAKDRSKGEILHCKLLFKKKLFRESDEAVTDPMFVQLSYSWIILSQLQHDYILGNYPIGRDDAAQLSALQILAEIGFVASPESCTDWNSLLERFLPRQIAIMRGKREWELDILSRYHSMEYLTKDDARQQFLRILRALPYGNSVFFCVRKIDDPIGLLPGRIILGINKRGVHFFRPVPKEYLHSAELRDIMQFGSSNTAVFFKMRVAGVLHIFQFETKQGEEICVALQTHINDVMLRRYSKARSAASGSANGDFPHNLKSPNDESYERRIQDLSKAIEESQRNADKLLDELNEKQKQEAKMQGELKGLKDSLKVNEQALENFACERDRLQSLCDGKEKELQAVVLENNSIKAKLAKLANVVAEQATKKHAVGESNLLVQKLQDEVKLCDEKLHEAEETIKRLENEKLSLQQKVAALDKKKVEEMDFLHKNFDEDFKSLKFQIHDLEKKLEATRQDLTASEAAVAAKDSELSSLQNSLKELEELKEMKEDIDRKNEQTAAILKMQRNQLAELEVLYKEEQVQRKRYFNIIEDMKGKIRVYCRLRPMNEKEVAEKERQVLTSVDEFTVEHPWKDDRAKQHIYDRVFDGDATQEDVFEDTKFLVQSAVDGYNVCIFAYGQTGSGKTFTIYGSENNPGLTPRATAELFKIMRRDKNKFSFSLKAYMMEIYQDTLIDLLLPKNAKHSRLDIKKDSKGMVSVENATIVSISTIEELNSIIHRGSERRHISETQMNEESSRSHLILSIVIETTNLQSQSVSRGKLSFVDLAGSERVKKSGSSGNQLKEAQSINKSLSALGDVISALSSGGQHIPYRNHKLTMLMSDSLGGNAKTLMFVNVSPSESNLEESYNSLMYASRVRSIVNDPSKNVSSKEVARLKKLVAYWKEQAGRRGQEEELEEIQDEQPRRERSDGRHSM* 1268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte12g00580 1267 SUPERFAMILY Second domain of FERM 374 496 IPR035963 -
Pte12g00580 1267 PRINTS Kinesin heavy chain signature 1082 1099 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pte12g00580 1267 PRINTS Kinesin heavy chain signature 1113 1131 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pte12g00580 1267 PRINTS Kinesin heavy chain signature 963 984 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pte12g00580 1267 PRINTS Kinesin heavy chain signature 1162 1183 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pte12g00580 1267 Pfam FERM central domain 401 501 IPR019748 -
Pte12g00580 1267 Coils Coil 734 775 - -
Pte12g00580 1267 Gene3D MyTH4 domain 90 273 IPR038185 -
Pte12g00580 1267 PANTHER KINESIN-LIKE PROTEIN KLP-3 604 1256 IPR027640 GO:0003777|GO:0007018
Pte12g00580 1267 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 891 1241 IPR027417 -
Pte12g00580 1267 CDD KISc_C_terminal 889 1214 - -
Pte12g00580 1267 FunFam Kinesin-like calmodulin-binding protein (ZWICHEL) 90 273 - -
Pte12g00580 1267 Pfam Kinesin motor domain 897 1212 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pte12g00580 1267 ProSiteProfiles FERM domain profile. 276 595 IPR000299 GO:0005856
Pte12g00580 1267 SMART MyTH4_1 111 271 IPR000857 GO:0005856
Pte12g00580 1267 Coils Coil 675 695 - -
Pte12g00580 1267 CDD FERM_C_KCBP 498 606 - -
Pte12g00580 1267 Gene3D - 1215 1263 - -
Pte12g00580 1267 FunFam Kinesin-like calmodulin-binding protein 835 1214 - -
Pte12g00580 1267 MobiDBLite consensus disorder prediction 1 42 - -
Pte12g00580 1267 FunFam Kinesin-like calmodulin binding protein 379 495 - -
Pte12g00580 1267 ProSiteProfiles MyTH4 domain profile. 111 271 IPR000857 GO:0005856
Pte12g00580 1267 Coils Coil 791 877 - -
Pte12g00580 1267 ProSiteProfiles Kinesin motor domain profile. 891 1212 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pte12g00580 1267 CDD FERM_B-lobe 402 494 IPR019748 -
Pte12g00580 1267 ProSitePatterns Kinesin motor domain signature. 1112 1123 IPR019821 GO:0003777|GO:0005524|GO:0007018
Pte12g00580 1267 Gene3D - 398 494 IPR014352 -
Pte12g00580 1267 Coils Coil 619 667 - -
Pte12g00580 1267 SUPERFAMILY PH domain-like 501 589 - -
Pte12g00580 1267 SMART B41_5 272 501 IPR019749 -
Pte12g00580 1267 MobiDBLite consensus disorder prediction 602 621 - -
Pte12g00580 1267 Gene3D - 499 607 IPR011993 -
Pte12g00580 1267 SUPERFAMILY Prismane protein-like 833 895 IPR011254 GO:0003824|GO:0016491
Pte12g00580 1267 FunFam Kinesin-like calmodulin-binding protein (ZWICHEL) 275 378 - -
Pte12g00580 1267 Gene3D Kinesin motor domain 878 1214 IPR036961 -
Pte12g00580 1267 Gene3D - 275 379 - -
Pte12g00580 1267 Pfam MyTH4 domain 164 269 IPR000857 GO:0005856
Pte12g00580 1267 SMART kinesin_4 889 1220 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pte12g00580 1267 MobiDBLite consensus disorder prediction 1238 1267 - -
Pte12g00580 1267 FunFam Kinesin-like calmodulin-binding protein (ZWICHEL) 499 608 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte12g00580 Pte-Chr12 5190039 5199747 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte12g00580 43 1262 Calmodulin-binding Proteins AT5G65930 72.973 0.0 1821
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte12g00580 - - qsa:O6P43_033475 1947.55