Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte12g00521 ATGGCGATCGAAGAAGACACGGAGAGTTGTGGCAGTATAGTTTTGCGGCCGTCACAAACACCGCGACAGCAACGGCAACACAGGCAGAAATTGGAAGCGTACAACGAAGTGCTTCGTCGAGTTCAGGAATCAAACTTTGAGGAAGCGAGTTTTCCGGATTTTGAAGATCAACTATGGCTTCATTTCAATCGTCTTCCTGCTCGATATGCATTGGATGTAAATGTGGAGAGAGCAGAGGACGTACTAACTCATAGGAGATTGTTGAAATTAGCTGAGGAACCTGCTAATCGACCCGCATTCGAAGTACGCTTAGTCCAGGTTTACCCTACCAGCACTGGCAATGGTGTCGATTCTGTCCATTCAGATTCCTCAATGAACGAGGACGCACAGAGTTCTTTTACTGCTACTACAAGGCAGGGGATCCATCCTCCACCTACCTTTGGTTCATCTCCTAATCTAGAAGCACTTGCACTTCAAGCCGTTAGAAATGCTCATGAAGATGATGAGAGTGCAATGAATATTACACCATATATCTACAGACCAATGCACGAGATCACCTTTTCAACCATTGACAAGCCTAAAATTCTTAGTCAGTTAACTTCATTGCTTGGTGATATTGGACTAAACATTCAAGAAGCTCATGCATTTTCAACAGTTGACGGCTTTTCTTTGGATGTCTTTGTAGTGCAAGGCTGGCCAAATGAGGAAACTGACGAGCTCAAGGAAGTGTTGAGAAAGGAAATTTTGAGGTCCCAGGAGCAATGCCAGTCAAGAGACCACACAATTTCTTCTGTTAAGAAGCATTTTGAGGAGAATGATAAACCATTTCCTAGTTTCATACGAATTCCATCTGATGGAACTGATGTCTGGGAAATTGATACTGATCTGCTCAAATTTGATAAGAAAGTTGCCTCTGGGACCTTTGGCATTCTGTATAAAGGTACCTATTGCAGTCAAGAAGTGGCTATTAAAATCCTAAACTCCGACCGAGTAAATGCAGAGATGTTAAGAGATTTTGCCCAGGAGGTCTATATCATGAGGAAAATTCGGCACAAGAATGTTGTACAATTTATAGGTGCCTGCACTCGTCCTCCAAATCTTTGCATTGTGACTGAATTTATGTCCAGAGGAAGCATATATGACTTTCTGCACAAACAAAATGGTCAATTTAAGCTTCCATCTTTACTGAAAGTAGCAATTGAAGTTTCAAGGGGAATGAATTATTTGCACCAAAACAACATAATCCACAGGGACCTCAAGTCTGCCAATCTTCTGATGGATGAAAATGATGTTGTTAAGGTCGCTGATTTTGGAGTTGCAAGGGTACAAGCTCAAACTGGAGTTATGACGGCTGAAACTGGAACTTACCGATGGATGGCTCCGGAAGTGATTGGGCATAAGCCATACGATCACAAGGCTGATGTTTTTAGTTTTGGAATTTTACTCTGGGAACTTCTCACAGGAGAGGTCCCATACTCGTGCTTAACCCCCTTACAAGCAGCAGTTGGTGTGGTGCAGAAGGGTCTTCGACCTACTATCCCCGACAATACTAATCCTAAAATTGCTGAATTGCTCGAGAGATGCTGGCAACAAGATCCTACACGAAGACCAAGTTTCTCTGATATAATAGAAATTATTCAGCGTATAACGAAGGAGGTCAACCATGACAGAGATAAATCATCTCGTCACCTTTTCTCAGGATTTAGACGCCATCACTGA 1719 0.4264 MAIEEDTESCGSIVLRPSQTPRQQRQHRQKLEAYNEVLRRVQESNFEEASFPDFEDQLWLHFNRLPARYALDVNVERAEDVLTHRRLLKLAEEPANRPAFEVRLVQVYPTSTGNGVDSVHSDSSMNEDAQSSFTATTRQGIHPPPTFGSSPNLEALALQAVRNAHEDDESAMNITPYIYRPMHEITFSTIDKPKILSQLTSLLGDIGLNIQEAHAFSTVDGFSLDVFVVQGWPNEETDELKEVLRKEILRSQEQCQSRDHTISSVKKHFEENDKPFPSFIRIPSDGTDVWEIDTDLLKFDKKVASGTFGILYKGTYCSQEVAIKILNSDRVNAEMLRDFAQEVYIMRKIRHKNVVQFIGACTRPPNLCIVTEFMSRGSIYDFLHKQNGQFKLPSLLKVAIEVSRGMNYLHQNNIIHRDLKSANLLMDENDVVKVADFGVARVQAQTGVMTAETGTYRWMAPEVIGHKPYDHKADVFSFGILLWELLTGEVPYSCLTPLQAAVGVVQKGLRPTIPDNTNPKIAELLERCWQQDPTRRPSFSDIIEIIQRITKEVNHDRDKSSRHLFSGFRRHH* 573
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte12g00521 572 Coils Coil 234 254 - -
Pte12g00521 572 ProSiteProfiles Protein kinase domain profile. 297 549 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte12g00521 572 Gene3D Phosphorylase Kinase; domain 1 286 375 - -
Pte12g00521 572 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 120 551 - -
Pte12g00521 572 FunFam serine/threonine-protein kinase HT1 376 566 - -
Pte12g00521 572 SUPERFAMILY ACT-like 182 246 IPR045865 -
Pte12g00521 572 ProSitePatterns Serine/Threonine protein kinases active-site signature. 414 426 IPR008271 GO:0004672|GO:0006468
Pte12g00521 572 PRINTS Tyrosine kinase catalytic domain signature 517 539 IPR001245 GO:0004672|GO:0006468
Pte12g00521 572 PRINTS Tyrosine kinase catalytic domain signature 408 426 IPR001245 GO:0004672|GO:0006468
Pte12g00521 572 PRINTS Tyrosine kinase catalytic domain signature 454 464 IPR001245 GO:0004672|GO:0006468
Pte12g00521 572 PRINTS Tyrosine kinase catalytic domain signature 371 384 IPR001245 GO:0004672|GO:0006468
Pte12g00521 572 PRINTS Tyrosine kinase catalytic domain signature 473 495 IPR001245 GO:0004672|GO:0006468
Pte12g00521 572 SUPERFAMILY Protein kinase-like (PK-like) 274 544 IPR011009 -
Pte12g00521 572 Gene3D Transferase(Phosphotransferase) domain 1 376 566 - -
Pte12g00521 572 CDD ACT_TyrKc 182 249 - -
Pte12g00521 572 CDD STKc_MAP3K-like 303 546 - -
Pte12g00521 572 SMART serkin_6 297 550 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte12g00521 572 Coils Coil 24 44 - -
Pte12g00521 572 Pfam Protein tyrosine and serine/threonine kinase 297 545 IPR001245 GO:0004672|GO:0006468
Pte12g00521 572 FunFam Serine/threonine-protein kinase isoform 1 287 375 - -
Pte12g00521 572 MobiDBLite consensus disorder prediction 1 27 - -
Pte12g00521 572 ProSiteProfiles ACT domain profile. 184 265 IPR002912 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte12g00521 Pte-Chr12 4639025 4647688 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte12g00521 1 572 MAP Kinase Kinase Kinase AT4G35780 67.826 0.0 802
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Pte12g00521 PK_Tyr_Ser-Thr 5.7e-74 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte12g00521 - - twl:120002426 866.3