Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte12g00515 ATGTTTTTGGAAGATACAGAAGCAATGGTTAGCGATCACGATCAGATGGAGGAAGTTGAGATGGAGGATATAGTTGAAGAGCCTATAGCAGATATAGATGGCAGTGACGCAAATAATCCGCTTGCTGCTGTAGAATATGTAGAAGATCTTTATGCAAACTACAGAAAAACGGAGAGTTTTTGCTGTGCCTCTCCAAACTACATGGAACAACAGGCTGACATTAATGAGAAGATGAGGGCCATACTGATCGATTGGCTAATCGAGGTCCACGACAAATTCGACTTAATGAATGAGACGCTATATCTTACTGTCAACCTCATAGATAGATTTTTGGCCCGGCAGCCGGTTGTTAGGAAAAAACTTCAGCTGGTCGGTTTGGTTGCTATGCTTTTAGCATGCAAATATGAAGAAGTTTCTGTCCCTGTGGTTGGTGATCTAATTCTAATATCAGACAAAGCTTACACAAGAAAGGAAGTTATTGAAATGGAGAGATTGATGCTTAACACATTGCAGTTTAACATGTCAATTCCAACACCATACGTTTTCTTGCAAAGGTTTCTCAAGGCAGCTCAAGCAGACAAGAAGCTCGAGCTATTATCATTCTTCTTGATAGAGCTTGCTTTGGTGGAGTATGAGATGCTCAAGTTTCCATCATCCTTGCTAGCTGCTGCAGCAGTTTATACTGCTCAGTGTACCATTTACGGTTCCAGACAGTGGAACAGGACTTGTGAATGGCACTCCAAATATTCAGAAGATCAGCTATCAGAATGTTCGAGACTGATGGTAGATTTCCACCAGAAAGCTGGGACTGGAAAACTTACAGCAGTGCACAGAAAGTACTGTACCTCTAAATTTTCCTATACCTCAAAATGTGAGCCAGCACGTTTTCTTCAGGAGACTCAAGTGTAG 909 0.4158 MFLEDTEAMVSDHDQMEEVEMEDIVEEPIADIDGSDANNPLAAVEYVEDLYANYRKTESFCCASPNYMEQQADINEKMRAILIDWLIEVHDKFDLMNETLYLTVNLIDRFLARQPVVRKKLQLVGLVAMLLACKYEEVSVPVVGDLILISDKAYTRKEVIEMERLMLNTLQFNMSIPTPYVFLQRFLKAAQADKKLELLSFFLIELALVEYEMLKFPSSLLAAAAVYTAQCTIYGSRQWNRTCEWHSKYSEDQLSECSRLMVDFHQKAGTGKLTAVHRKYCTSKFSYTSKCEPARFLQETQV* 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte12g00515 302 SUPERFAMILY Cyclin-like 176 294 IPR036915 -
Pte12g00515 302 CDD CYCLIN_AtCycB-like_rpt2 177 293 - -
Pte12g00515 302 Gene3D - 49 290 - -
Pte12g00515 302 Pfam Cyclin, C-terminal domain 177 293 IPR004367 -
Pte12g00515 302 Pfam Cyclin, N-terminal domain 49 175 IPR006671 -
Pte12g00515 302 PANTHER CYCLINS 27 279 IPR039361 -
Pte12g00515 302 ProSitePatterns Cyclins signature. 79 110 IPR006671 -
Pte12g00515 302 SMART cyclin_7 181 263 IPR013763 -
Pte12g00515 302 SMART cyclin_7 84 168 IPR013763 -
Pte12g00515 302 CDD CYCLIN_AtCycB-like_rpt1 26 172 - -
Pte12g00515 302 PIRSF Cyclin_A_B_D_E 3 302 IPR046965 GO:0016538|GO:0044772
Pte12g00515 302 Gene3D - 63 175 - -
Pte12g00515 302 FunFam G2/mitotic-specific cyclin-1 162 289 - -
Pte12g00515 302 SUPERFAMILY Cyclin-like 38 174 IPR036915 -
Pte12g00515 302 SMART Cyclin_C_2 177 294 IPR004367 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte12g00515 Pte-Chr12 4580236 4582712 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte12g00515 1 297 Core Cell Cycle Gene Families AT1G20610 66.667 8.31e-149 422
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte12g00515 K21777 - rcu:8268759 499.975