Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte12g00507 ATGAAACAGGTGAAGTTGTTCTTATCCGAGGATTGCCCATCAAAAGTTGGTCACAAGTTTCAAGATCATCTCCAAGCAAAGGCATCGTGGATGTTGCAGCCTAACACAATTGATTCTCATGAAATTCCTCCTGGCTTCGAAGGGAAACATTTTCAGAACAGATCAAAGGAAGAAGCCTCTCTGATTCCACGGATGAAGTGGAGATGCCCACCAAGGGTAATGGATTATTTGCCTTTCATTACGATGCTTGGGATAGATTTTTCTGATATGTTTCTTCGTATGCAATTCTACTCCCAAGTGACCCTCAATTATGGTCTATTTAAGCTTTTCTTTGATCTCCGCAAGCTTAGGTTTATGCTGAGTGGCAACTGGCATGTAGCAGCTGGTGAAGAAAGTGAAGAGAAAGATGTCCAAAAGCTTAGAGAAATGAGAGTTCTTGAAGCTGTTTATCCACACCACTCTTCCATCCCTCGGAGCCCCAGCGTTTCCATGGAGGTTCAAGACAAGAATTATGATGACAGTGCTGTACCTATCGTCCCTGTCATTCCCATTGAGGAAGAAGAGTCTATGGATATGAATTCGAAAGTGACGTCCCCTGTGACAGTGCAGCCCGAATTCTTTGCCCAAGACAAGGCAAGAACTGCAGCTTGTATTCGTTCAGCCATTTCCAATGCTGCTCCCAGTGGAGAATCTGGGGTTTCCCCTGATTTAAATGCAGATGTGGTAGCTTCTGCCTCAGCTGCGTTAGCTGCCATCATGAAGTGTAATGAACAGGGGAATATGATTGACACAGATTTGCTTATCAAGATCCTGACTGATCAGAAAATGAGCGAGAGATTGATTGCTGAACATGCCCGAGCGGCAAGTGCCAAAATGGCTCCCATGTGCAGCTTGAAGCCTTCAGATCAATGGCTTCCATTATCAGGAGCCACTATTGATGCACACAAGCCCATAAGCCGAAATAGGGTTGGTATGCAGCCTTCCAATCCCATTCCTAAGTCTGCAACTCCAGTTGATGTGAACGGACATGTTAACGATAACGCAGTCTCAGGCAGTTTACCAGCTTCAAATCAGAAGCCTTGTTCAGCATTTCCTTCGCCTGCTCCTAAACTTGATATGAACAGGTTGATGAATCAGAATGCAGTTGGTTTATCCACTTTGAATTCTAAGACAACAACCCTGGAAGTTCCTCCTCCAACTGGAAGGACTGATTTGGATGTTAATGTGATGCAAAATATTCACCATCATTCTCCAAGGGTTATAAATTCACAGCGTCCAACATCTGGGGTGAAGAGAGTAGCATCTGTAGCGTTTCCTGCATCCTGTGCTGAACCGAAATCAGCATTACCGCCTATTGGTAATGGAAACCTTCATCCGGTATCGAATCAAGTGCGACCTGGTATGAACTCACTGCTTAATAACCCTCCAAATACAGGTCCTATTCCTTCTGCTATGAATGGAAGTGGCCTTGTGAAGAATGCAAACTACTATAAGAAGTTAATTAGGGAACATGGGATGGATCAGCAAGAAATATTGAAACCACAACTAGGCAATCGTCAAAGTAACATACAAGATTTGAAAATGGTACATAGCATGAAAGCAGGGGGAGTGAAACCTAAATACCAGAAACCTTGCTTGTACTTCAACACTCCAAAGGGTTGTCGGAATGGAATGAATTGTCCCTATGCGCATGACGCTGGTATCCAATTACCCAGTGGCAGTGTGGGGATGGAGGGTGCAAAAAGATTGAGACCATGA 1758 0.442 MKQVKLFLSEDCPSKVGHKFQDHLQAKASWMLQPNTIDSHEIPPGFEGKHFQNRSKEEASLIPRMKWRCPPRVMDYLPFITMLGIDFSDMFLRMQFYSQVTLNYGLFKLFFDLRKLRFMLSGNWHVAAGEESEEKDVQKLREMRVLEAVYPHHSSIPRSPSVSMEVQDKNYDDSAVPIVPVIPIEEEESMDMNSKVTSPVTVQPEFFAQDKARTAACIRSAISNAAPSGESGVSPDLNADVVASASAALAAIMKCNEQGNMIDTDLLIKILTDQKMSERLIAEHARAASAKMAPMCSLKPSDQWLPLSGATIDAHKPISRNRVGMQPSNPIPKSATPVDVNGHVNDNAVSGSLPASNQKPCSAFPSPAPKLDMNRLMNQNAVGLSTLNSKTTTLEVPPPTGRTDLDVNVMQNIHHHSPRVINSQRPTSGVKRVASVAFPASCAEPKSALPPIGNGNLHPVSNQVRPGMNSLLNNPPNTGPIPSAMNGSGLVKNANYYKKLIREHGMDQQEILKPQLGNRQSNIQDLKMVHSMKAGGVKPKYQKPCLYFNTPKGCRNGMNCPYAHDAGIQLPSGSVGMEGAKRLRP* 586
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte12g00507 585 ProSiteProfiles Zinc finger C3H1-type profile. 539 567 IPR000571 GO:0046872
Pte12g00507 585 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 6-RELATED 3 73 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte12g00507 Pte-Chr12 4540594 4542985 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Pte12g00507 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte12g00507 - - qsa:O6P43_024850 380.563
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte12g00507 12 4540594 4542985 Pte12g00507 12 4540594 4542985 RCT
Pte14g00864 14 30078494 30084005 Pte12g00507 12 4540594 4542985 RCT