Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte12g00505 ATGGAGTCGACGGAGCCATGTGTACCACCTGGTTTTCGGTTTCACCCTACAGATGAAGAGCTTGTTGGATATTATCTGAGAAAGAAAGTAGCTTCACAGAAGATTGATCTCGACGTTATAAGAGATATTGATCTATACCGAATTGAACCATGGGATCTCCAAGAGAGATGCAGGATTGGTTATGAAGAGCAGAATGAGTGGTATTTCTTCAGCCACAAGGATAAGAAGTATCCGACAGGTACAAGGACTAACAGAGCAACTATGGCGGGGTTCTGGAAAGCAACTGGCAGAGATAAGGCTGTGTATGATAAAGCAAAACTCATTGGTATGAGGAAAACCCTAGTATTCTACAAAGGAAGAGCCCCAAATGGACAGAAAACTGACTGGATCATGCATGAGTATAGACTGGAATCTGATGAGAATGGACCTCCTCAGGAAGAAGGATGGGTTGTGTGCAGGGCATTCAAGAAAAGAATCACCAGTCAAGCAAAGGCCATGGATGGATGGGACTCTGGATACTTCTATGAGGAAACTAGTGGGGCTAGCTCAATGGTTGATCCGATTGATTTCATATCAAGGCAGCCACAGAATATTTTAGGTCAAAGTTTCTTGTGTAAGCAAGAGATAGAAGCAGACCCTTTGAGTTTGATGCATTCAGAAAGTTTCGTACAGCTTCCTCAGCTGGAAAGTCCGCCTTTGCAGTTAATAAAGAGGCCGCCGAGCTCAGTGTCTCTTGTATCAGAGAATAACGAAGAACATGATCAAAATATAACGCCCAATAACATTGCAAATCAGAAAGTGACGACTGACTGGAGGGCTCTTGACAAGTTTGTTGCTTCACAGTTGAGCCAAGAAGACGGGAACGAAGGCAATGCAATGCAAAGCTTTGAAATGCATGACAATTCAGACATGGGATTGTTACTATTGCAGAGTAGTAGGGATGAAGGGAACAAGCTAAGCTCATACTTGAATTCTAGCTCAGATTGTGATATTGGGATATGCGTATTTGAAAAATTTAGAGAATAA 1026 0.425 MESTEPCVPPGFRFHPTDEELVGYYLRKKVASQKIDLDVIRDIDLYRIEPWDLQERCRIGYEEQNEWYFFSHKDKKYPTGTRTNRATMAGFWKATGRDKAVYDKAKLIGMRKTLVFYKGRAPNGQKTDWIMHEYRLESDENGPPQEEGWVVCRAFKKRITSQAKAMDGWDSGYFYEETSGASSMVDPIDFISRQPQNILGQSFLCKQEIEADPLSLMHSESFVQLPQLESPPLQLIKRPPSSVSLVSENNEEHDQNITPNNIANQKVTTDWRALDKFVASQLSQEDGNEGNAMQSFEMHDNSDMGLLLLQSSRDEGNKLSSYLNSSSDCDIGICVFEKFRE* 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte12g00505 341 FunFam NAC domain-containing protein 17 161 - -
Pte12g00505 341 SUPERFAMILY NAC domain 6 157 IPR036093 GO:0003677|GO:0006355
Pte12g00505 341 ProSiteProfiles NAC domain profile. 8 157 IPR003441 GO:0003677|GO:0006355
Pte12g00505 341 Gene3D NAC domain 17 160 IPR036093 GO:0003677|GO:0006355
Pte12g00505 341 Pfam No apical meristem (NAM) protein 9 136 IPR003441 GO:0003677|GO:0006355
Pte12g00505 341 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 7 259 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte12g00505 Pte-Chr12 4521189 4526024 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte12g00505 1 337 NAC Transcription Factor Family AT2G18060 64.402 5.68e-163 457
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Pte12g00505 NAM 3.8e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte12g00505 - - aprc:113869508 560.836