Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte12g00503 AACAATCTCACGGGTGAAGTACCTACTTCAATTTTCTGCAATGTTTCTGTCTATACGCCGTCGCTCCGGATCGTTCAGCTAGGCTTTAATGCGCTCACGGATTTGGTTGGCTACGACATGAAGACTTGTTTCAGTGTTCTTCAGGTATTGGATCTTCAACACAACCGCATTCATGTCACGTTTCCCTTATGGTTAACACTTATTTCCACACTTAAAGTTATTGACTTTTCAAGCAATGCAATCTCTGGTGTGATTCCAAATGAAATTGGAAATCTCACGAAACTAGAGGAATTAAAGATGGCTAATAATTCATTCACGGGAACCATTCCTGTTGAACTTGAGAGATGTACTTCTTTAAGTGTCGTAGATTTTCAAGGGAACCAGCTTTCGGGTTCACTTCCTTCATTCTTTGGTGGCATGAAAGGCTTGAAATCTCTGTCCCTAAGTGCGAACATGTTTTCTGGTCCCGTTCCGACGAGTTTTAGCGATCTCTGGCAGCTTCAAACATTACGCTTGAGTCGTAATAGATTGAGTGGGACCCTGCCTGAGGGGATAATGGGGTTGAGTAATTTGAGTACTTTAGATTTGAGCAAGAACATGTTTTCAGGTGATGTTCCTGTCGGTATCGGAAATCTGAGTAGGCTGACGGTTCTTAATCTGAGCGGCAATGGCTTTTCTGGGAAGATACCTGCTAGTGTAGGCAATCTTTTCAGGTTAACCACTATTGATTTGAGCAAGCAGAATCTCTCTGGTCAACTGCCGTCTGAGCTATCAGGATTGCCCAATCTACAAGTTATTGCTCTGCAGGAGAACAAACTTTCTGGTGATGTGCCTGAAGGGTTCAGTAGTTTGATGAGCTTGCTCCATTTGAACCTCAGTTTTAATACTTTCTCTGGCCACATTCCTGAAAGTTATGGATTTCTTCGATCTTTGGTTGTTCTTTCATTGTCTGGAAATCGCATCTCTGGGATAATTCCTGCGGAGATTGGAAACTGCTCTAGCATTGAAATTCTTGAACTTGGATCGAATTCCTTGACTGGTCATATCCCATCTGATCTCTCTCGTTTGTCCCGGTTAAAAGAGCTTGATCTGAGTAGGAACAATTTAACAGGGGTAATCCCTGAAGAAATTTCAAGATGTTCTTCATTAACTGTTTTGTTTCTAGAGGGCAATCATATTTCTGGTAGCATACCGGAGTCGCTTTCTGCGTTATCAAACATGACCATTCTGGACCTCTCTGCTAACAATTTGAATGGAGAGATTCCAGCTAGCATTTCCAAGCTTCCCGCTTTAACATATTTCAATGTATCGACAAATAACCTAGAAGGTGAGATACCAGCTGGTCTGGGTTCTCGGTTTGACAATCCATCTGCATTCGCAAATAATCGTGACTTGTGCAGCAAGCCACTGGATAAGAAGTGTGGAGACGTTGTGGCTAGGAATAGGAAAAGGCTGATTATATTAATTGTTGTAGTTGCTGTTGCAGCTTGCTTATTGGCAGCTTTTTGTGGTCTGTACATCTTCAGCCTTTTGCGGTGGCGCAAGAAGCTTAAAGAAAAGGCATCCGGAGAGAAGAAGAAGAGTCCTGCAAGCTCTAGGACCAGTGGAGGTCGTGCCAGCATTGACAACGGCGGTCCCAAGCTCGTCATGTTTAACAACAAAATAACACTGGCAGAAACCATTGTAGCAACAAGGCAATTCGATGAAGAAAATGTGCTGAGTAGAACGAAATATGGATTGGTTTTCAAGGCTTCCTACAATGATGGGATGATGCTCTCTATCCGCAGCCTTCCAGATGGTCGATTAGACGAGAATACATTCAGAAAAGAAGCTGAATCACTGGGAAAAGTGAAGCACCGGAACCTAACGGTTCTGAGAGGCTACTATGCCGGACCGCCCGACATGAGACTTCTTGTTTATGACTACATGCCTAATGGAAACCTTGGCACCCTCTTGCAAGAAGCTTCCCACCAAGATGGCCATGTACTGAATTGGCCAATGCGCCATTTGATTGCACTTGGAATTGCTCGTGGCTTGGCCTTCTTACACCAATCCACAATGGTTCATGGTGACATAAAACCACAGAATGTGCTGTTTGATGCAGATTTTGAAGCTCATTTGTCTGATTTTGGTCTACAGCCTTTCGCAGCGGCAACCCCAGCTGAAGCCTCTACTTCAAGATCAGTTGGCACATTGGGTTATGTATCTCCTGAAGCAGTTTTGACGGGGGAGGTCACCAAAGAATCTGATGTCTACAGCTTTGGTATTGTCCTGCTTGAGCTTCTGACTGGAAAACGACCGGTGATGTTCACCCAGGATGAAGATATTGTGAAATGGGTGAAGAGACAATTGCAAAGGGGTCAAATTACCGAACTGTTAGAGCCGGGCTTACTTGAGCTTGACCCTGAATCATCGGAGTGGGAAGAGTTTTTGCTTGGTGTGAAGGTTGGTTTGCTTTGCACGGCCCCAGACCCTGGTGATCGGCCAACCATGACTGACGTAGTGTTCATGCTGGAAGGTTGCCGGGTTGGACCGGACATCCCCTCATCCGCCAACCCCACATCTCATCATTCACCGGAATAA 2583 0.4468 NNLTGEVPTSIFCNVSVYTPSLRIVQLGFNALTDLVGYDMKTCFSVLQVLDLQHNRIHVTFPLWLTLISTLKVIDFSSNAISGVIPNEIGNLTKLEELKMANNSFTGTIPVELERCTSLSVVDFQGNQLSGSLPSFFGGMKGLKSLSLSANMFSGPVPTSFSDLWQLQTLRLSRNRLSGTLPEGIMGLSNLSTLDLSKNMFSGDVPVGIGNLSRLTVLNLSGNGFSGKIPASVGNLFRLTTIDLSKQNLSGQLPSELSGLPNLQVIALQENKLSGDVPEGFSSLMSLLHLNLSFNTFSGHIPESYGFLRSLVVLSLSGNRISGIIPAEIGNCSSIEILELGSNSLTGHIPSDLSRLSRLKELDLSRNNLTGVIPEEISRCSSLTVLFLEGNHISGSIPESLSALSNMTILDLSANNLNGEIPASISKLPALTYFNVSTNNLEGEIPAGLGSRFDNPSAFANNRDLCSKPLDKKCGDVVARNRKRLIILIVVVAVAACLLAAFCGLYIFSLLRWRKKLKEKASGEKKKSPASSRTSGGRASIDNGGPKLVMFNNKITLAETIVATRQFDEENVLSRTKYGLVFKASYNDGMMLSIRSLPDGRLDENTFRKEAESLGKVKHRNLTVLRGYYAGPPDMRLLVYDYMPNGNLGTLLQEASHQDGHVLNWPMRHLIALGIARGLAFLHQSTMVHGDIKPQNVLFDADFEAHLSDFGLQPFAAATPAEASTSRSVGTLGYVSPEAVLTGEVTKESDVYSFGIVLLELLTGKRPVMFTQDEDIVKWVKRQLQRGQITELLEPGLLELDPESSEWEEFLLGVKVGLLCTAPDPGDRPTMTDVVFMLEGCRVGPDIPSSANPTSHHSPE* 861
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte12g00503 860 Gene3D Phosphorylase Kinase; domain 1 542 642 - -
Pte12g00503 860 SUPERFAMILY Protein kinase-like (PK-like) 549 848 IPR011009 -
Pte12g00503 860 FunFam Putative LRR receptor-like serine/threonine-protein kinase 530 642 - -
Pte12g00503 860 SUPERFAMILY L domain-like 13 298 - -
Pte12g00503 860 Gene3D Ribonuclease Inhibitor 85 186 IPR032675 -
Pte12g00503 860 FunFam LRR receptor-like serine/threonine-protein kinase RPK2 643 846 - -
Pte12g00503 860 ProSitePatterns Serine/Threonine protein kinases active-site signature. 687 699 IPR008271 GO:0004672|GO:0006468
Pte12g00503 860 Pfam Protein kinase domain 577 834 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte12g00503 860 Gene3D Ribonuclease Inhibitor 189 477 IPR032675 -
Pte12g00503 860 PRINTS Leucine-rich repeat signature 359 372 - -
Pte12g00503 860 PRINTS Leucine-rich repeat signature 404 417 - -
Pte12g00503 860 SMART serkin_6 567 837 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte12g00503 860 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 116 838 - -
Pte12g00503 860 SUPERFAMILY L domain-like 209 467 - -
Pte12g00503 860 ProSiteProfiles Protein kinase domain profile. 567 847 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte12g00503 860 Gene3D Ribonuclease Inhibitor 1 84 IPR032675 -
Pte12g00503 860 Gene3D Transferase(Phosphotransferase) domain 1 643 846 - -
Pte12g00503 860 SMART LRR_typ_2 212 236 IPR003591 -
Pte12g00503 860 SMART LRR_typ_2 260 283 IPR003591 -
Pte12g00503 860 SMART LRR_typ_2 404 428 IPR003591 -
Pte12g00503 860 SMART LRR_typ_2 164 188 IPR003591 -
Pte12g00503 860 SMART LRR_typ_2 356 380 IPR003591 -
Pte12g00503 860 SMART LRR_typ_2 308 332 IPR003591 -
Pte12g00503 860 SMART LRR_typ_2 140 163 IPR003591 -
Pte12g00503 860 SMART LRR_typ_2 92 116 IPR003591 -
Pte12g00503 860 Pfam Leucine rich repeat 238 295 IPR001611 GO:0005515
Pte12g00503 860 Pfam Leucine rich repeat 166 224 IPR001611 GO:0005515
Pte12g00503 860 Pfam Leucine rich repeat 47 104 IPR001611 GO:0005515
Pte12g00503 860 Pfam Leucine rich repeat 334 393 IPR001611 GO:0005515
Pte12g00503 860 MobiDBLite consensus disorder prediction 522 541 - -
Pte12g00503 860 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 185 477 - -
Pte12g00503 860 FunFam Piriformospora indica-insensitive protein 2 85 183 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte12g00503 Pte-Chr12 4502319 4504901 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte12g00503 1 861 Receptor kinase-like Gene Family AT4G36180 68.187 0.0 1126
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-3 Pte12g00503 Pkinase 1.3e-34 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte12g00503 - - qsa:O6P43_024844 1313.9