Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte12g00499 ATGCGAACACTCTGTGACGCTTGTGAAAGCGCAGCTGCTATCGTCTTCTGCGCTGCTGATGAGGCTGCCCTATGTCATGCCTGTGATGAAAAGGTGCACTTGTGTAATAAGCTTGCAAGTCGACACGTAAGGGTGGGACTTGCCAGTCCAAGTGACGTTTCTCGTTGTGACATATGCGAAAATGCACCTGCTTTCTTTTACTGCGAGACGGATGGAACTTCCCTTTGTTTGCAATGTGATATGATTGTCCATGTTGGAGGGAAAAGAACACATAGCAGATATCTTCTATTTAGGCAGAGAGTTGAGTTTCCAGGGGATAAACCTAGTCATGCTGAAGACCCAGCTTCACAACCCATGGGACCGAATGAGACCAAAAGAGGACAAAATCACCTTTCTAAATTGAAAACTGGAGAGAACCAACAGAATCACAAGATATCTCCAGTTTCAGATTCAGAAACTGATGGTAATGGGCATTCCCAGATGGACACTAAAATGATAGATTTGAACATGAATCCACAGCGGTTACATGAACAAGTTTCCAATAATCAGGTGAGACCGCATTGGAAGTGA 570 0.4439 MRTLCDACESAAAIVFCAADEAALCHACDEKVHLCNKLASRHVRVGLASPSDVSRCDICENAPAFFYCETDGTSLCLQCDMIVHVGGKRTHSRYLLFRQRVEFPGDKPSHAEDPASQPMGPNETKRGQNHLSKLKTGENQQNHKISPVSDSETDGNGHSQMDTKMIDLNMNPQRLHEQVSNNQVRPHWK* 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte12g00499 189 FunFam B-box zinc finger protein 19 2 92 - -
Pte12g00499 189 ProSiteProfiles Zinc finger B-box type profile. 51 96 IPR000315 GO:0008270
Pte12g00499 189 SUPERFAMILY B-box zinc-binding domain 48 88 - -
Pte12g00499 189 MobiDBLite consensus disorder prediction 105 189 - -
Pte12g00499 189 Pfam B-box zinc finger 53 91 IPR000315 GO:0008270
Pte12g00499 189 Pfam B-box zinc finger 3 42 IPR000315 GO:0008270
Pte12g00499 189 ProSiteProfiles Zinc finger B-box type profile. 1 47 IPR000315 GO:0008270
Pte12g00499 189 PANTHER B-BOX ZINC FINGER PROTEIN 22 1 169 - -
Pte12g00499 189 MobiDBLite consensus disorder prediction 121 189 - -
Pte12g00499 189 CDD Bbox1_BBX-like 4 47 - -
Pte12g00499 189 Gene3D Classic Zinc Finger 2 94 - -
Pte12g00499 189 SMART bboxneu5 1 47 IPR000315 GO:0008270
Pte12g00499 189 SMART bboxneu5 51 96 IPR000315 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte12g00499 Pte-Chr12 4488899 4490392 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte12g00499 1 182 C2C2-CO-like Transcription Factor Family AT4G38960 61.957 5.44e-77 226
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF DBB Pte12g00499 zf-B_box 1.6e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte12g00499 - - qsa:O6P43_024841 321.627