Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte12g00498 ATGAACCTCTCTAGAAATGGTCGTAGTAGTAGTACTACTGGTAAGGCTACAACCCAGGCTTGTGCTGCATGTAAATACCAACGTAAAAAGTGCGTCCTTGATTGCACTCTCGCTCCTTATTTTCCTCACGATCGACAGAGGCAATTCCTCAATGCACATAAATTATTTGGTGTCAGCAACATAACCAAGATCATTAAAAACCTTAGTCCGATAGAGAAAGACGAGGCCATGCGTACCATCATTTTTCAATCTGATGTTCGTGCCACTGATCCTGTTGGAGGGTGTTATAGAATCATACGTGACTTGCAAACTCAGATTGAATACAGCAGGGCTGAACTCGACCTTGTTCTACAACAGCTTGTCATTTTTCGAGCCCAAGCTCATCAACAACAGCAGAATCAACCACATCATAATCAAGGTTACATGACAACACAGCCTACCGATGATGTTAACTCTGCTGCATTGATGAACGTCGGTGGTGGTGGGGTTGAAAATCGTGATAATATTATAAATGCGGATCCTTTGAGCTTGTACAATAATCCAGGTGGGGTGCATTACCATTATCTTCATCAGCAGCAACAACAAGAAGATCAATACGTTGTGGTTCAGCAGAGTAACAACAATGGTAGCAATTGTAACACCACGCACATGGATGATCCAAATTCGTGGGGCGTCCAGAACACAACGTCTACGTTGTCAACGTTGTCATTGCATGGTAACAACGCTGTTGCAGATGAATATGAAAGCAGAACAGTCTTAGACGGCATGCCCTCATCATCTAATAATTTCAGATTTGATATTCCAGAAGAATTTGAACGGAGTGATGAGGCAGTTTTGTTTAAAGTGGATGATGAGGTACTAATAAAAGCAGAGGGCGAACCTTTCCGTCAAGTTCAAGATCATGATCTGAAAGCTGCAGCTAATTTGTTTATTCTGACAAATTGCAACAGTTAA 954 0.4182 MNLSRNGRSSSTTGKATTQACAACKYQRKKCVLDCTLAPYFPHDRQRQFLNAHKLFGVSNITKIIKNLSPIEKDEAMRTIIFQSDVRATDPVGGCYRIIRDLQTQIEYSRAELDLVLQQLVIFRAQAHQQQQNQPHHNQGYMTTQPTDDVNSAALMNVGGGGVENRDNIINADPLSLYNNPGGVHYHYLHQQQQQEDQYVVVQQSNNNGSNCNTTHMDDPNSWGVQNTTSTLSTLSLHGNNAVADEYESRTVLDGMPSSSNNFRFDIPEEFERSDEAVLFKVDDEVLIKAEGEPFRQVQDHDLKAAANLFILTNCNS* 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte12g00498 317 ProSiteProfiles LOB domain profile. 19 120 IPR004883 -
Pte12g00498 317 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 18 151 - -
Pte12g00498 317 Pfam Lateral organ boundaries (LOB) domain 20 115 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte12g00498 Pte-Chr12 4485854 4487323 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte12g00498 19 136 AS2 family AT3G13850 73.729 1.42e-60 192
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Pte12g00498 LOB 5.6e-34 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte12g00498 - - vum:124830493 296.975