Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte12g00496 ATGGGAGAGAAACTGTTCGCGTCTTCATCTTCACATGGCAACGAGTCCAGTCCGTTGGCTGTGATTGAACAAGGTTACCTCAATTGGCTTAAAGGAGTTCGCTCGTTCAAGCATTCTCTCTTCAAAAAAGCTAAGCGGAAGCTAAAGTCATGTTACACTATAAAAGTACATAAGAAAAAAAGCCAGGGGGATTTTGTTACGGTACAAGAGGCCATCTCTTCTCTGCCTCCAGTTACTAAATGCAGAGTGGTCATCTCTGTAGCCCCTGGAACTTACAGGGAAAAAGTTGAGATTCCTCCAACTATGGCTTACATAACCTTGGAAGGTAATGATGCAGACACCACCATTATAGAGTGGGATGACACGGCAGACAGAAATGGAGAGAATGGTCGTCCATTAGGCACCTTTGCATCAGCCACATTTGCGATCAATGCCCCAAACTTCATTGCCAGAAATATCACGTTCAAGAACCAAGCGCCAAAGCCACCTTCAGGAGCGCTGGGAAAGCAGGCAGTAGCTTTAAGGATTTCAGGTGATACAGCAGCCTTCATAGGATGTAAATTCATAGGAGCACAGGACACTCTCTATGACCATCTGGGGAGGCATTATTTCAAAGATTGCTACATTGAGGGTTCAGTTGATTTCATATTCGGAAATGGGCTATCTCTTTACAAGAATTGCCATTTGCATGCCAACACAAATAGCTATGGAGCCTTAACTGCACAGAAGAGACAGAACTTCCTCGAAGCGACCGGCTTCTCGTTTGTCAACTGCAAGATCACGGGGTCAGGAGCTCTCTACTTAGGAAGAGCCTGGGGAACTTTCTCCAGGGTGGTGTTTGCTTACACATACATGGACAAGATAATCACTCCAAAAGGATGGTACAACTGGGGAGATAAGAACAGGGAAATGACAGTGTTTTTCGGACAGTACAGGTGCACAGGTCCAGGTGCCAACTTTGTTGGTCGTGTGTCATGGTCTAGGGAGCTCACCTGCGAGGAGGCCGAGCCGTTCATTTCACTTAGTTTCATAGATGGCCACCAATGGCTACCAAAGCACCTACTGTAG 1068 0.4625 MGEKLFASSSSHGNESSPLAVIEQGYLNWLKGVRSFKHSLFKKAKRKLKSCYTIKVHKKKSQGDFVTVQEAISSLPPVTKCRVVISVAPGTYREKVEIPPTMAYITLEGNDADTTIIEWDDTADRNGENGRPLGTFASATFAINAPNFIARNITFKNQAPKPPSGALGKQAVALRISGDTAAFIGCKFIGAQDTLYDHLGRHYFKDCYIEGSVDFIFGNGLSLYKNCHLHANTNSYGALTAQKRQNFLEATGFSFVNCKITGSGALYLGRAWGTFSRVVFAYTYMDKIITPKGWYNWGDKNREMTVFFGQYRCTGPGANFVGRVSWSRELTCEEAEPFISLSFIDGHQWLPKHLL* 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte12g00496 355 Gene3D - 50 354 IPR012334 -
Pte12g00496 355 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 47 350 - -
Pte12g00496 355 SUPERFAMILY Pectin lyase-like 52 352 IPR011050 -
Pte12g00496 355 ProSitePatterns Pectinesterase signature 2. 209 218 IPR033131 -
Pte12g00496 355 Pfam Pectinesterase 59 346 IPR000070 GO:0030599|GO:0042545
Pte12g00496 355 FunFam Pectinesterase 49 352 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte12g00496 Pte-Chr12 4475968 4478270 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte12g00496 62 350 Carbohydrate Esterase AT5G47500 51.379 1.16e-103 307
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte12g00496 K01051 - cit:102626135 556.214