Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte12g00481 ATGAATTTGCCGGAGCAGTGGCACTGGGAAAATGCCACCGCGGGCGCCGTTGCTGGCTTTGCCACTGTCGCTGTTATGCATCCACTGGACGTAGTCCGTACTAGATTTCAAGTTAACGATGGACGAGTCCCCCACCTCCCAATTTACAAAAACACTGCACATGCTGTTCTAACCATTGCTCGTTCAGAGGGATTAAGAGGGTTATATGCAGGCTTTCTTCCTGCTGTTATTGGCTCAACCGTTTCATGGGCTTTGTACTTTTTCTTCTATGACAAAGCCAAACAAAGGTATGCTAGGAATAGAGAGGAACAACTTGGCATTGGTCTTCATCTTGCATCAGCTGCAGAAGCAGGGTCTTTGGTGTGCTTGTGCACAAACCCCATATGGCTTATAAAAACAAGACTACAGCTTCAAACTCCTCTCTATCAGAGACCTTATTCTGGGCTTTACGATGCAATAAAAACCATAGTGAGAGAAGAAGGACCAAGTGCACTTTACAAAGGGATTGTTCCTGGCCTTTTTCTGGTCTCCCATGGTGCAGTGCAGTTTACTGCATATGAAGAGCTTCGCAAGATTTTTGTTGACTTAAAGTGTAGAGAGAGGAAAAAACAGTCGCAAAATGCTAATAACATGTTGAATTCGATGGATTATGCCATCCTTGGAGCATCTTCAAAAGTTGCTGCCATTCTTCTAACATATCCATTTCAGGTGATCCGAGCTCGATTACAGCAACAGCCAAGTAATGGTGGGGTTCCAAGGTATATGGATAGCTGGCATGTTGTGAAGGAAACAGCTCGATTTGAAGGTCTTCGAGGCTTTTATAAGGGAATCACCCCAAACCTTCTGAAAAATGTTCCTGCTGCTTCAGTAACTTTTATTGTCTATGAAAATGTTCTAAAAATACTTAAATTGGCTAGGAGTGACCACACACCCAATTAG 939 0.4356 MNLPEQWHWENATAGAVAGFATVAVMHPLDVVRTRFQVNDGRVPHLPIYKNTAHAVLTIARSEGLRGLYAGFLPAVIGSTVSWALYFFFYDKAKQRYARNREEQLGIGLHLASAAEAGSLVCLCTNPIWLIKTRLQLQTPLYQRPYSGLYDAIKTIVREEGPSALYKGIVPGLFLVSHGAVQFTAYEELRKIFVDLKCRERKKQSQNANNMLNSMDYAILGASSKVAAILLTYPFQVIRARLQQQPSNGGVPRYMDSWHVVKETARFEGLRGFYKGITPNLLKNVPAASVTFIVYENVLKILKLARSDHTPN* 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte12g00481 312 FunFam Folate transporter 1, chloroplastic 102 307 - -
Pte12g00481 312 SUPERFAMILY Mitochondrial carrier 9 297 IPR023395 -
Pte12g00481 312 ProSiteProfiles Solute carrier (Solcar) repeat profile. 212 301 IPR018108 -
Pte12g00481 312 Pfam Mitochondrial carrier protein 7 100 IPR018108 -
Pte12g00481 312 Pfam Mitochondrial carrier protein 105 194 IPR018108 -
Pte12g00481 312 Pfam Mitochondrial carrier protein 215 303 IPR018108 -
Pte12g00481 312 ProSiteProfiles Solute carrier (Solcar) repeat profile. 6 96 IPR018108 -
Pte12g00481 312 ProSiteProfiles Solute carrier (Solcar) repeat profile. 105 192 IPR018108 -
Pte12g00481 312 FunFam folate transporter 1, chloroplastic isoform X1 2 101 - -
Pte12g00481 312 Gene3D Mitochondrial carrier domain 8 302 IPR023395 -
Pte12g00481 312 PANTHER MITOCHONDRIAL NICOTINAMIDE ADENINE DINUCLEOTIDE TRANSPORTER 1-RELATED-RELATED 8 305 IPR044712 GO:0006862|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte12g00481 Pte-Chr12 4328194 4333118 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte12g00481 28 302 Chloroplast and Mitochondria Gene Families AT2G47490 37.143 2.05e-49 165
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte12g00481 K15115 - qsu:112000861 494.197