Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte12g00477 ATGTTTGATGCCTCTTCTTCAATGCACGGCAAGCTCAAACGCCAAGACTACTATGGAAGATTCTACGTTAACTGCAACACAGTTGGTGTGCCATTTGTGGTGGCAGCAGCTAATTGTAAGCTATCCGATGTCAATCACATTGATGGGGCAGATGTTGGATATGCAAAAGACTTGGTTTGCGATTTTCCACCAGAAGATGAGACTGGAAAGCATTCTTTAGTTATGCAAATGACAACGTTTCTATGTGGGGGTTTTACAATTGGAATTGGCGTATGGCATGCTATGTGCGATGGAACTGGCACAGTTCAAATAGCAAACGCACTTACTGAGCTTGCAAGCGGGATGAGTGAGCCCTCAGTGATGCCTGTGTGGGAGAGGGAAAGACTGAATGGTTCCCTTTTGAAGGAACCAATTGATCAGTTTCGCCGTATTTGCCAGCAACAGATCTTGTGTTGCAGAGTTTTCATGTGGATAAATGAGTCTAAGGAATCTTAA 495 0.4404 MFDASSSMHGKLKRQDYYGRFYVNCNTVGVPFVVAAANCKLSDVNHIDGADVGYAKDLVCDFPPEDETGKHSLVMQMTTFLCGGFTIGIGVWHAMCDGTGTVQIANALTELASGMSEPSVMPVWERERLNGSLLKEPIDQFRRICQQQILCCRVFMWINESKES* 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte12g00477 164 Gene3D - 6 138 IPR023213 -
Pte12g00477 164 Pfam Transferase family 8 142 - -
Pte12g00477 164 PANTHER ACYL TRANSFERASE 4 8 133 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte12g00477 Pte-Chr12 4267637 4269334 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte12g00477 8 137 Monolignol Biosynthesis Gene Families AT5G48930 32.331 3.60e-12 61.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte12g00477 K20240 - cpap:110823889 148.288