Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte12g00476 ATGGCAAACGTAACCCAATTGGAAATCCCTTTCTCAGTTGATGTCAAGGACGTTATCCATGTTACACCTTCAAAACCAACACCAAATGTCATCCTTCCTCTGTCTACCATTGACAGTGATTACTATCATGTCGTGCCGGCATTCAGTGTTCGAGTTTACAGAGGAAGATTTGATTGCAATTTGAATCCAGCTGATGTGTTGAGGGAAGCTCTCTCTAAGGCTTTGGTGTATTACTATCCACTGGCAGGCAAGCTCAAACGCCAAGAGCATGGAAGGCTCTATGTTCATTGCAACGCATTTGGGGTGCCCTTTGTGGTGGCATCAGCCAATTGTAAGCTAGCCAATGTCAATTACTTTGATGGCATAGATATTGGATATGCAAAACAGTTGGTTTCCGATTTCCCACAAGAAGATGAGACTGGAATGCATTCTATGGTGCTGCAAGTGACAACATTTCTATGTAGGGGTTTTACAATTGGAATGGGCTCGTCGCATGCTATCTGCGATGGAACTGGCGCTGTTCAAATATTTAACGCACTTACTGAGCTTGCAAGCGGGATGAGTGGGCCCTCAGTGATGCCTGCGTGGGAGAGGGAAAGATTGAATGGTTCATTCTTGAAAGAACCAATCCAGCATCCTATGGATCCAGCTGATGCAGCAGTTTCTCCATATTTGCCAACAACAGATATTGGTTGGGAGTGTTTTCATATTGATAGCAACAGTCTAAGGTGTCTTAAATTCAGTTTGATAAAGGAAAGTGGGGATCCAACATTGAAGGAGAGCAGCTTCACAACTTTTGAAGCCCTTGGTGCCTATTTATGGCGATCAAAATGTAAAGCTTTGAAATTGAATCATGACGGTGAGACATTTCTACGCATGAGCGTGGGATTAAGGAAACGCATGCATCCTCCAATACCTATCGGCTATTATGGAAACGCATACATATGGCCTTGCCTGGTGATGAAGGTAATTGATCTAACCGGAGGACCCCTTTTCAATGTTGTGAAGCGTATCAAGGCGTTGAAAAACCATGCTTTGACTAATGAATTCACGAGGAACGCACTCAACTATTCAGAAACCGCAAGAAGACTTCAGATTTGTCCTAAAGCTCCAGGTGCAGTTACAGATCTTACAGAGTGGAGACAATTGGGAACTATGCAAGAAGTAGATTTCGGATGGGGAAGATCAGTAAATTTGGTTGCAACGTCAAAAGACGTGCTGGAAGATTTTGATTTATGTATCATTGCACCTCCTTCTTCTGTGAATCCTTCTATGGGAGATGGAGTAAGAGTTTTTGTCAAACTCCCCGAGGCATGCATGGCTGTATTCAAAGAGGAACTTGATGCCTTGAAAGAAAGTCATGCAATGATCGACACTCAGATCTTACGAACTAATTAA 1398 0.4313 MANVTQLEIPFSVDVKDVIHVTPSKPTPNVILPLSTIDSDYYHVVPAFSVRVYRGRFDCNLNPADVLREALSKALVYYYPLAGKLKRQEHGRLYVHCNAFGVPFVVASANCKLANVNYFDGIDIGYAKQLVSDFPQEDETGMHSMVLQVTTFLCRGFTIGMGSSHAICDGTGAVQIFNALTELASGMSGPSVMPAWERERLNGSFLKEPIQHPMDPADAAVSPYLPTTDIGWECFHIDSNSLRCLKFSLIKESGDPTLKESSFTTFEALGAYLWRSKCKALKLNHDGETFLRMSVGLRKRMHPPIPIGYYGNAYIWPCLVMKVIDLTGGPLFNVVKRIKALKNHALTNEFTRNALNYSETARRLQICPKAPGAVTDLTEWRQLGTMQEVDFGWGRSVNLVATSKDVLEDFDLCIIAPPSSVNPSMGDGVRVFVKLPEACMAVFKEELDALKESHAMIDTQILRTN* 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte12g00476 465 Gene3D - 221 447 IPR023213 -
Pte12g00476 465 Gene3D - 9 212 IPR023213 -
Pte12g00476 465 PANTHER ACYL TRANSFERASE 4 11 449 - -
Pte12g00476 465 Pfam Transferase family 12 448 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte12g00476 Pte-Chr12 4239793 4241190 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte12g00476 13 397 Monolignol Biosynthesis Gene Families AT5G48930 30.693 5.34e-42 152
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte12g00476 K20240 - gmx:100801843 436.802