Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte12g00475 ATGACCATGACAAACGTAACCCAATTGGAAATCCCTTTCTCAGTTAATGTCAAGGAAGTTATCCATGTTACACCTTCAAAACCAACACCAAATGTCATCCTTCCTCTGTCTACCATTGACAGTGATTACTTTCACCACGCCCCGGCATTCAGTGTTCGAGTTTACAAAGGAAGATTTGATCGCAATTTGAATCCAGCTGATGTGTTGAGGGAAGCTCTCTCTAAGGCTTTGGTGTATTACTATCCACTGGCAGGCAAGCTCAAACGCCAAGAGCATGGAAGGCTCTATGTTCATTGCAACGCAGTTGGGGTGCCCTTTGTGGCGGCATCAGCCAATTGTAAGCTACCCGATGTCAATTACATTGATGGCAAAGGTGTTGGATATGCCAAACAGTTGGTTACTGATTTCCCACAAGAAGATGAGAATGGAATGCATTCTATCGTGCTGCAAGTGACAACATTTCTATGTGGGGGTTTTACAATTGGAATGGGCTCGTGGCATGCTATCTGCGATGGAACTGGCGCTGTTCAAATATTTAACGCACTTAACGAGCTTGCAAACGGGATGAGTGAGCCCTCAGTGATGCCTGCGTGGGAGAGGGAAAGATTGAATGGTTCATTCTTGAAAGAACCAATCCAGCTTCCTATGGATCCAGCTGATGCAGCAGTTTCGCCATATTTGCCAACAACAGATCTTGTTTGGGAGTGTTTTCATATTGATAGCAACAGTATAAGGTGTCTTAAATTCAGTTTGGTAAAGGAAAGCGGGGATCCAACATTGAAGGAGAGCAGCTTCACAACTTATGAAGCCCTTGGTGCCTATTTATGGCGATCAAAATGTAAAGCTTTGAAATTGAATCATGACGGTGAGACATTGCTATGCATGAGCGTGGGATTAAGGAAACGCATGCATCCTCCAATACCTATCGGCTATTATGGAAACGCATACATATGGGCTTACCTGGTGATGAAGGTAATTGATCTAACCGGAGGACCCCTTTTCAATGTTGTGAAGCGTATCAAGGCGTTGAAAAATCATGCTTTCACCAATGAATTCACGAGGAACGCACTCAACTATTCAGAAACGGCAAGAAGACTTCAGATTTGTCCTGAAGCTCCAGGTGCAGTTACAGATCTTACAGAGTGGAGACAATTGGGATCTGTGCAAGAAGTAGATTTCGGATGGGGAAGATCAGTAAATTGGGTTGCGACGTCAAAAGACGTGCTGGACGATTGTGATTTATGTATCATTGCACCTCCTTCTTCTGTGAATCCTTCTATGGAAGATGGAGTAAGAGTTTTTGTCAAACTCCCCGAGGCATGCATGGCTGCATTCAAAGAGGAACTTGATGCCTTGAAAGAAAGTGATGCAATGAACTGTAGCAACTCCTGA 1392 0.4404 MTMTNVTQLEIPFSVNVKEVIHVTPSKPTPNVILPLSTIDSDYFHHAPAFSVRVYKGRFDRNLNPADVLREALSKALVYYYPLAGKLKRQEHGRLYVHCNAVGVPFVAASANCKLPDVNYIDGKGVGYAKQLVTDFPQEDENGMHSIVLQVTTFLCGGFTIGMGSWHAICDGTGAVQIFNALNELANGMSEPSVMPAWERERLNGSFLKEPIQLPMDPADAAVSPYLPTTDLVWECFHIDSNSIRCLKFSLVKESGDPTLKESSFTTYEALGAYLWRSKCKALKLNHDGETLLCMSVGLRKRMHPPIPIGYYGNAYIWAYLVMKVIDLTGGPLFNVVKRIKALKNHAFTNEFTRNALNYSETARRLQICPEAPGAVTDLTEWRQLGSVQEVDFGWGRSVNWVATSKDVLDDCDLCIIAPPSSVNPSMEDGVRVFVKLPEACMAAFKEELDALKESDAMNCSNS* 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte12g00475 463 PANTHER ACYL TRANSFERASE 4 13 451 - -
Pte12g00475 463 Gene3D - 222 449 IPR023213 -
Pte12g00475 463 Gene3D - 11 211 IPR023213 -
Pte12g00475 463 Pfam Transferase family 14 450 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte12g00475 Pte-Chr12 4142504 4143895 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte12g00475 15 399 Monolignol Biosynthesis Gene Families AT5G48930 30.288 3.32e-42 153
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte12g00475 K20240 - gmx:100801843 439.884