Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte12g00474 ATGAAGATCCTCCGAAATTCTACAGGTGGTGAACGGTATAGGAGTTACAATGATGAAGAAGCAATTCTTGGCATGCAGCAGCTACGTCCAATCTCTACTGCTCCTACATTACATCCACCTTTTGGCAATAAGGTTGACGCTAGTGTCTCAACATGGGAGCAATCTATTCTCATGAATGCTGGTCCAGCCATGCAGCAGCCATCATGTGGTCTTCCAGTCACGTCTTTTGTGCATCAGGTAGGCTTTAACAAGGTTAGAGATGCCAATGCTGGTCCTTCATTTATATCTCAGTTAGCTGCTGATGAAGGATCTAGAACTGGAATGAAAGGGCTTGGAATCTTGAGTTCCATTAAAGCAAGCACTCCTGCCTCAGAGAGAGTTCCATCTGGGGTACTTTTAAGTGGCAGCAGACAGAAGTCTGGCACTAGCATTATAGAGGTAGAGGGTTCCACTCCTCCAAGTCAAAGCGAATTGGCATCTTCAAGCCGGCAAATGACTATATTTTATGGTGGTCAGGCTCATGTATATGATGATGTCCATCCTAACAAGGCAGATATTATAATGGCTTTGGCTGGATCAAATGGAGGGTCATGGTCCACCACGTACTCACCCAAATCTATAGAAAAAGTAGCTGGTGAAGGGGATGTGCTAAGTGGAGAAAATGAGATAGGTGTAGGGAATAAAAGAGCATATCCTCGGGAACTTCAGGGTAGATTGCCAGTAGCTGCCATCAACTCTGAGGATAGGCTAGTTACCCCATCAGGGTTACATCAGGTAAGCAACGCAAGATACATAAAGAGCTGCATTTCAAGCAACGGAAACGAGCTCTGA 831 0.4513 MKILRNSTGGERYRSYNDEEAILGMQQLRPISTAPTLHPPFGNKVDASVSTWEQSILMNAGPAMQQPSCGLPVTSFVHQVGFNKVRDANAGPSFISQLAADEGSRTGMKGLGILSSIKASTPASERVPSGVLLSGSRQKSGTSIIEVEGSTPPSQSELASSSRQMTIFYGGQAHVYDDVHPNKADIIMALAGSNGGSWSTTYSPKSIEKVAGEGDVLSGENEIGVGNKRAYPRELQGRLPVAAINSEDRLVTPSGLHQVSNARYIKSCISSNGNEL* 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte12g00474 276 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 105 226 IPR040390 -
Pte12g00474 276 Pfam tify domain 160 192 IPR010399 -
Pte12g00474 276 SMART tify_2 158 193 IPR010399 -
Pte12g00474 276 ProSiteProfiles Tify domain profile. 158 193 IPR010399 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte12g00474 Pte-Chr12 4100479 4101332 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte12g00474 55 191 Tify Gene Family AT4G32570 49.275 5.17e-32 119
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Pte12g00474 tify 9.9e-15 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte12g00474 - - qsa:O6P43_015637 325.865