Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte12g00472 ATGGCAAACGTAACCCAATTGGAAATCCCTTTCTCAGTTGATGTCAAGGACTTTATCCATGTTACACCTTCAAAACCAACACCAAATGTCATCCTTCCTCTGTCTACCATTGACAGTGATTACTATCACGACGTGCCGGCATACATGGTTCGAGTTTACAAGGGAAGATTGGATCCAGAACTTAATCCAGCTGAGGTGATAAGAGAAGCTCTCTCTAAGGCTTTGGTCTATTACTACCCACTGGCAGGCAAGCTCAAACGCCAAGACTACTATGGAAGATTCTACGTTAACTGCAACACAGTTGGTGTGCCATTTGTGGTGGCATCAGCCAATTGTAAGCTATCCGATGTCAATCACATTGATGGGGCAGATGTTGGATATGCAAAAGACTTGGTTTGCGATTTTCCACCAGAAGATGAGACTGGAAAGCATTCTTTAGTTCTGCAAGTGACAACGTTTCTATGTGGGGGTTTTACAATTGGAATTGGCGTATGGCATGCTATCTGCGATGGAACTGGCACGGTTCAAATAGCAAACGCACTTACTGAGCTTGCAAGCGGGATGAGTGAGCCCTCAGTGATGCCTTTTTGGGAGAGGGAAAGACTGAATGGTTCCCTTTTGAAGGAACCAATCCAGCTTCCTATGGATCCAGCTGATGCAGCAGTTTCACCATATTTGCCAACAACAGATCTTGTTTGGGAGTGTTTTCATATTGATAGCAACAGTCTAAGGTGTCTTAAATTCAGTTTGATAAAGGAAAGTGGGGATCCAACATTGAAGGAGAGCAGCTTAACAACTTATGAAGCCCTTGGTGCCTATTTATGGCGATCAAAATGTAAAGCTTTGAAATTGAATCATGACGGTGAGGCATTGCTATGCATGAGCGTGGGATTAAGGAAACGCATGCATCCTCCAATACCTATCGGCTATTATGGAAACGCATACATATGGGCTTACCTGGTGATGAAGGTAACTGATCTAACCGGAGGACCCCTTTTCAATGTTGTGAAGCGTATCAAGGCGTTGAAAAATCATGCTTTCACTAATGAATTCACGAGGAACGCACTCAACTTTTCAGAAACGGCTAGAAGACTTCAGATTTGTCCTGACGCTCCAGGTGCAGTTACAGATCTTTCAGAGTGGAGACAATTCGGATCTATGCAAGAAGTAGATTTCGGATGGGGTAGATCAGTAAATTGGGTTGCAACGTCAAAAGACGTGCTTGACGATTTTGATTCATGTATCATTGCACCTCCTCCTTCTGTGAATCCTTCTATGGGAGATGGAGTAAGTGTTTTTGTCAAACTCCCCGAGGCATGCATGGCTGCATTCAAAGAGGAACTTGATGCCTTGAAAGAAAGTGATGCAATGAACTGTAGCAACTCCTGA 1389 0.4377 MANVTQLEIPFSVDVKDFIHVTPSKPTPNVILPLSTIDSDYYHDVPAYMVRVYKGRLDPELNPAEVIREALSKALVYYYPLAGKLKRQDYYGRFYVNCNTVGVPFVVASANCKLSDVNHIDGADVGYAKDLVCDFPPEDETGKHSLVLQVTTFLCGGFTIGIGVWHAICDGTGTVQIANALTELASGMSEPSVMPFWERERLNGSLLKEPIQLPMDPADAAVSPYLPTTDLVWECFHIDSNSLRCLKFSLIKESGDPTLKESSLTTYEALGAYLWRSKCKALKLNHDGEALLCMSVGLRKRMHPPIPIGYYGNAYIWAYLVMKVTDLTGGPLFNVVKRIKALKNHAFTNEFTRNALNFSETARRLQICPDAPGAVTDLSEWRQFGSMQEVDFGWGRSVNWVATSKDVLDDFDSCIIAPPPSVNPSMGDGVSVFVKLPEACMAAFKEELDALKESDAMNCSNS* 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte12g00472 462 PANTHER ACYL TRANSFERASE 4 11 450 - -
Pte12g00472 462 Pfam Transferase family 12 449 - -
Pte12g00472 462 Gene3D - 221 448 IPR023213 -
Pte12g00472 462 Gene3D - 9 210 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte12g00472 Pte-Chr12 4046506 4047894 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte12g00472 13 398 Monolignol Biosynthesis Gene Families AT5G48930 29.665 1.44e-38 143
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte12g00472 K20240 - gmx:100801843 424.476