Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte12g00471 ATGGAAGAACTTCTGTTGCTTGCTCAAAACTACTGCGACATTATCTTGGTAGGAGTGGCTTGCATGGCAGCTACAGTTTTGATCCCAAAAGCTTGGAAAAAGGTTACGAATGAAAAAAGCGATGTCCCTGGCAGACTGGGAATGCCTTTTCTTGGAGAAACTTTCTCTTTCCTTTCAGCCACTAATAGTACCAAAGGCTGCTATGAATTTGTCAGACTCCGAAGAACCTGGTATGGGAAATTGTTCAAGACAAGATTATTTGGCAAGATCCATGTGTTTGTTCCTAGCCCTGAATCTGCAAGGATGATATTTGCTAATGACTTTGTGCAATTCAATAAAGGATATGTGAAATCAATGGCAGATGCTGTGGGAAAGAAAAGCTTGCTATGCGTACCCCATGAGCACCACAAAAGGATCAGGCGTCTTCTCTCTGATCCTTTCTCCATGAATGCTTTATCGAAGTTTGTCAAGAGCTTCGATCAAATGTTGACTGAAAGACTGAGACAGTTAGCAGCAGGTGGGAAAACCTTCAAAACGTTGGACTTCAGCATGAAGATGACGTTCGATGCAATGTGTAATATGCTGATGAGCATATCAGACGAATTGTTGCTGAGACAGATAGAGACAGACTGCACTGCTGTTTCTGACGCCATGCTATCATTTCCTGTCATGATCCCTGGAACTAGATACTACAATGGCATCAAGGCACGAGAAAGACTTATGGGGACCTTCGAAGAAATGATTGCCAGAAGAAGAAGTGGACAAGAGTCCTCAGAAGATTTCCTGCATACTATGTTGCAGAGAGATTCATATCCTGCAAATGAGAAGCTGGATGATACAGAGCTTATGGATAATCTGCTGACTTTGATCATTGCAGGACAGACCACCACTGCAGCTGCTATGATGTGGAGTGTCAAATTCTTGAATGATAACATAGAAGCACAGGACAGGCTTAGGGAAGAACAATTGTCAATAAAGAAAAGTAAGGCACAAGGAGCTCCATTATGTCTTGATGATCTCAGTAAAATGTCCTATGGTTCACAGGTTGTGAAGGAAACATTGAGAATGTCCAATGTGTTGTTGTGGTTCCCTCGAGTTGCACTTAACGATTGCAGAATCGAAGGCAAGCTTTCTCTGATTATGTGGCACGTGAACATCGATGCCACATGTATACACTACGATCCAGATTTGTACAAGGATCCTTTGGCCTTTAACCCCTCAAGATTCGATGAAATACAGAAGCCATATAGTTATATCCCTTTTGGATCTGGCCCTCGCACATGCCTAGGGATGAACATGGCAAAGATCACCATGCTGGTCTTTTTGCATCGACTGATTAGTGGCTACACTTGGACTATTGATGATTTGGATATCAGCCTTGAAAAGAAGGCACACATACCAAGGTTGAAGAGTGGATGCCCTATTACTCTGAAACCCTTGGGAGAAATCCAAGGAGCACAAATTTGA 1467 0.4267 MEELLLLAQNYCDIILVGVACMAATVLIPKAWKKVTNEKSDVPGRLGMPFLGETFSFLSATNSTKGCYEFVRLRRTWYGKLFKTRLFGKIHVFVPSPESARMIFANDFVQFNKGYVKSMADAVGKKSLLCVPHEHHKRIRRLLSDPFSMNALSKFVKSFDQMLTERLRQLAAGGKTFKTLDFSMKMTFDAMCNMLMSISDELLLRQIETDCTAVSDAMLSFPVMIPGTRYYNGIKARERLMGTFEEMIARRRSGQESSEDFLHTMLQRDSYPANEKLDDTELMDNLLTLIIAGQTTTAAAMMWSVKFLNDNIEAQDRLREEQLSIKKSKAQGAPLCLDDLSKMSYGSQVVKETLRMSNVLLWFPRVALNDCRIEGKLSLIMWHVNIDATCIHYDPDLYKDPLAFNPSRFDEIQKPYSYIPFGSGPRTCLGMNMAKITMLVFLHRLISGYTWTIDDLDISLEKKAHIPRLKSGCPITLKPLGEIQGAQI* 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte12g00471 488 SUPERFAMILY Cytochrome P450 40 479 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte12g00471 488 Gene3D Cytochrome P450 32 480 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte12g00471 488 Coils Coil 311 331 - -
Pte12g00471 488 CDD CYP90-like 72 479 - -
Pte12g00471 488 PRINTS P450 superfamily signature 348 359 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte12g00471 488 PRINTS P450 superfamily signature 428 439 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte12g00471 488 PRINTS P450 superfamily signature 419 428 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte12g00471 488 PRINTS P450 superfamily signature 292 309 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte12g00471 488 FunFam cytochrome P450 90A1-like isoform X1 32 480 - -
Pte12g00471 488 PANTHER CYTOCHROME P450 26 42 452 - -
Pte12g00471 488 Pfam Cytochrome P450 47 455 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte12g00471 488 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 421 430 IPR017972 GO:0005506|GO:0016705
Pte12g00471 488 PRINTS E-class P450 group I signature 418 428 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte12g00471 488 PRINTS E-class P450 group I signature 301 327 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte12g00471 488 PRINTS E-class P450 group I signature 428 451 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte12g00471 488 PRINTS E-class P450 group I signature 8 27 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte12g00471 488 PRINTS E-class P450 group I signature 281 298 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte12g00471 488 PRINTS E-class P450 group I signature 387 411 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte12g00471 Pte-Chr12 4011629 4014417 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte12g00471 43 452 Cytochrome P450 AT1G19630 45.169 3.24e-121 360
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte12g00471 - - qsu:112035144 763.837
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte12g00471 12 4011629 4014417 Pte12g00471 12 4011629 4014417 RCT