Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte12g00451 ATGGCAAACGTAACCCAATTGGAAATCCCTTTCTCAGTTGATGTCAAGGACTTCATCCATGTTACACCTTCAAAACCAACACCAAATGTCATCCTTCCTCTGTCTACCATTGACAGTGATTACTATCACGACGTGCCGGCATACATTGTTCGAGTTTACAAGGGAAGATTGGATCCAGAACTTAATCCAGCTGAGGTGATAAGAGAAGCTTTCTCTAAGGCTTTGGTCTATTACTACCCACTGGCAGGCAAGCTCAAACGCCAAGACTACTATGGAAGATTCTACGTTAACTGCAACACAGCTGGTGTGCCATTTGTGGTGGCATCAGCCAATTGTAAGCTATCCGATGTCAATCACATTGATGGGGCAGATGTTGGATATGCAAAAGACTTGGTTTGCGATTTTCCACCAGAAGATGAGACTGGAAAGCATTCTTTAGTTCTGCAAGTGACAACGTTTCTATGTGGGGGTTTTACAATTGGAATTGGCGTATGGCATGCTATCTGCGATGGAACTGGCACGGTTCAAATAGCAAACGCACTTACTGAGCTTGCAAGCTGGATGAGTGAGCCCTCAGTGATGCCTGTTTGGGAGAGGGAAAGACTGAATGGTTCCCTTTTGAAGGAACCAATCCAGCTTCCTATGGATCCAGCTGATGCAGCAGTTTCGCCATATTTGCCAACAACAGATCTTGTTTGGGAGTGTTTTCATATTGATAGCAACAGTCTAAGGTGTCTTAAATTCAGTTTGATAAAGGAAAGTGGGGATCCAACATTGAAGGAGAGCAGCTTCACAACTTATGAAGCCCTTGGTGCCTATTTATGGCGATCAAAATGTAAAGCTTTGAAATTGAATCATGACGGTGAGACATTGCTATGCATGAGCGTGGGATTAAGGAAACGCATGCATCCTCCAATACCTATCGGCTATTATGGAAACGCATACATATGGGCTTACCTGGTGATGAAGGTAACTGATCTAACCGGAGGACCCCTTTTCAATGTTGTGAAGCGTATCAAGGCGTTGAAAAATCATGCTTTCACTAATGAATTCACGAGGAACGCACTCAACTATTCAGAAACGGCAAGAAGACTTCAGATTTGTCCTGACGCTCCAGGTGCAGTTACAGATCTTTCAGAGTGGAGACAATTCGGATCTATGCAAGAAGTAGATTTCGGATGGGGTAGATCAGTAAATTGGGTTGCAACGTCAAAAGACGTGCTTGACGATTTTGATTCATGTATCATTGCACCTCCTCCTTCTGTGAATCCTTCTATGGGAGATGGAGTAAGTGTTTTTGTCAAACTCCCCGAGGCATGCATGGCTGCATTCAAAGAGGAACTTGATGCCTTGAAAGAAAGTCATGCAATGAACTGTGGCAACTCCTGA 1389 0.4392 MANVTQLEIPFSVDVKDFIHVTPSKPTPNVILPLSTIDSDYYHDVPAYIVRVYKGRLDPELNPAEVIREAFSKALVYYYPLAGKLKRQDYYGRFYVNCNTAGVPFVVASANCKLSDVNHIDGADVGYAKDLVCDFPPEDETGKHSLVLQVTTFLCGGFTIGIGVWHAICDGTGTVQIANALTELASWMSEPSVMPVWERERLNGSLLKEPIQLPMDPADAAVSPYLPTTDLVWECFHIDSNSLRCLKFSLIKESGDPTLKESSFTTYEALGAYLWRSKCKALKLNHDGETLLCMSVGLRKRMHPPIPIGYYGNAYIWAYLVMKVTDLTGGPLFNVVKRIKALKNHAFTNEFTRNALNYSETARRLQICPDAPGAVTDLSEWRQFGSMQEVDFGWGRSVNWVATSKDVLDDFDSCIIAPPPSVNPSMGDGVSVFVKLPEACMAAFKEELDALKESHAMNCGNS* 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte12g00451 462 PANTHER ACYL TRANSFERASE 4 11 450 - -
Pte12g00451 462 Gene3D - 9 210 IPR023213 -
Pte12g00451 462 Pfam Transferase family 12 449 - -
Pte12g00451 462 Gene3D - 221 448 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte12g00451 Pte-Chr12 3816811 3818199 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte12g00451 13 398 Monolignol Biosynthesis Gene Families AT5G48930 29.665 2.52e-38 142
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte12g00451 K20240 - gmx:100801843 426.017