Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte12g00448 ATGGCGTATATGTGTGCGGACAGTGGAAACCTCATGGCGATTGCTCAACAAGTCATTAAGCAAAAACAACAGCAAGAGCAGCAACAGCAGCAGCACCTCTTCCACAGTCCCCACCACCATCAACAGCAACACCAGCAGCTACTTGGGGTTTATCCTTTATCTCTAAACCCATGGAGTAATACTACACCGTTGCCATATGGTATTTCTGCTTCTGGATTTTCCGACCCTTTTCAGGTATCTGAAGGACCCGACTCCGGCGAACCCGGATTCCAGTTTCCTTGCATGGAGACTCATAGCTCCGGCTTCAGATTCTCAGATTTCGCTGGTGACAGTGGACCTGGTCCTTCTAATACTGGTGAGTTTGACTCAGATGAGTGGTTGGATAGCTTAATGGGTGGTGGAGATTCGACGGATAGTTCAAATCTGCCACCTGCATGTGACGCTTGGCATAACAATGCGGACTTTGGTCTTTATGGGTCTGACCCATTTACAGTTTGCCCCGCTCGAGTCTCGGCCGCCTCTGATCTCAACCAAGTCGTGTTCTCTGATTCACAGCGAAGCACAGTTCCTCTTCAAACCAGTCAAGTGCCTGCTACTTGGACTTCACCACCGTCTCCTTCTCCACCAACTTTGGTCAACGACCACAAGCTGACGAATTCACCGCCGTCGCCACCTACTCTTCTAAAGGATGACACTTCACGTGCCTCATCCAGCTCTGTGGAAATCGAGTCTGCACCACCGCTTGTAAAGGCGCTAGTGGACTGCGCTCGACTGTTGGAATCTGAACCTGATCGTGCGTTAAAGTCACTGATTCAACTTAGAGAGTCAGTGTCAGAGGACGGAGATCCCACTGAAAGAGTGGCGGCTTACTTCTCTGAAGCTCTTAGTAGCAGATTGTCTTTGCAAGCAAAGAACAACGCCATGACTATGGCGGAGACTACCCCTGAGGAGTTAACTTTAGCTTACAAAGCTCTCAATGATGCCTGCCCCTACTCCAAGTTTGCACATTTGACTGCAAACCAAGCAATCCTCGAAGCCACTGAAGGGGCTGCTAAGATTCATATTGTCGATTTTGGAATAGTGCAAGGAATTCAATGGGCAGCTCTGCTTCAAGCTTTCGCTACCAGGGCCAGTGGAAAGCCAACTAGCATTCGGATCTCCGGCATACCGTCCCAGGTTTTAGGAAAATTTTCTGGGTCTTCTATTTCTGCAACAGGCAATCGTCTCCAAGAGTTTGCCAAGCTTCTTGAGTTGAATTTCGAGTTCGTACCAATTCTCACGCCAATTCACGAGCTTGCTGAGTCTAGTTTTGTTATTGAACCAGACGAAGCTTTAGCAGTTAATTTCATGCTTCAATTGTACAACCTCTTGGAAGAAAGTCCGATCGCAGTTCAAACTGCTTTGCGTCTAGCAAAATCATTGAAACCCAAAATCGTGACTCTTGGGGAGTACGAAGCAAATTTGAACCGCGTGGGGTTTCTGGAGCGGTTCAAGACGGCATTGATGTACTTCTGTGCACTGTTTGAGTCCCTCGAGGCGAATTTAGCTCGTAACTCGCATGAGAGATTTCAAGTGGAGAAGCTGCTACTAAGCCGTCGAGTTGCCGGAGTACTTTGCACAGAGGAACATGGAAGTGCGAGAGAAAGAACTGAGAGCAAAGAACAGTGGAAGGTCTTGATGGAAAGTTCAGGTTTTGAGTCGGTCAAACTGAGTCATTACGCAGTGAGTCAAGCTAAGCTTTTATTATGGAACTACGATTACAGTCCTCTGTATTCTTTGATCGAATCTGAACCAGCGTTCTTGACTCTGGCTTGGAAGGGTGTCCCTCTTTTGACAGTTTCTTCGTGGCGTTAA 1854 0.4779 MAYMCADSGNLMAIAQQVIKQKQQQEQQQQQHLFHSPHHHQQQHQQLLGVYPLSLNPWSNTTPLPYGISASGFSDPFQVSEGPDSGEPGFQFPCMETHSSGFRFSDFAGDSGPGPSNTGEFDSDEWLDSLMGGGDSTDSSNLPPACDAWHNNADFGLYGSDPFTVCPARVSAASDLNQVVFSDSQRSTVPLQTSQVPATWTSPPSPSPPTLVNDHKLTNSPPSPPTLLKDDTSRASSSSVEIESAPPLVKALVDCARLLESEPDRALKSLIQLRESVSEDGDPTERVAAYFSEALSSRLSLQAKNNAMTMAETTPEELTLAYKALNDACPYSKFAHLTANQAILEATEGAAKIHIVDFGIVQGIQWAALLQAFATRASGKPTSIRISGIPSQVLGKFSGSSISATGNRLQEFAKLLELNFEFVPILTPIHELAESSFVIEPDEALAVNFMLQLYNLLEESPIAVQTALRLAKSLKPKIVTLGEYEANLNRVGFLERFKTALMYFCALFESLEANLARNSHERFQVEKLLLSRRVAGVLCTEEHGSARERTESKEQWKVLMESSGFESVKLSHYAVSQAKLLLWNYDYSPLYSLIESEPAFLTLAWKGVPLLTVSSWR* 618
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte12g00448 617 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 233 611 IPR005202 -
Pte12g00448 617 MobiDBLite consensus disorder prediction 185 241 - -
Pte12g00448 617 ProSiteProfiles GRAS family profile. 239 617 IPR005202 -
Pte12g00448 617 MobiDBLite consensus disorder prediction 211 241 - -
Pte12g00448 617 Pfam GRAS domain family 248 617 IPR005202 -
Pte12g00448 617 MobiDBLite consensus disorder prediction 185 200 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte12g00448 Pte-Chr12 3786358 3788646 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte12g00448 1 618 GRAS Transcription Factor Family AT5G66770 57.051 0.0 634
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Pte12g00448 GRAS 5.9e-108 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte12g00448 - - qsa:O6P43_033716 853.973