Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte12g00431 ATGATGATGACTTTTGGAGCTAAAGGGGGCGGTGCAGCAGCTGAGTCTTCAAGTGAAGATCTCAACGTGTTCTTCTCTGATGGTGGAAGGCAACCATTAGTGCAGCCATCCTTATCAAAGAAGCGGTTTAGGACAAAGTTCACGCAGCAGCAAAAGGACAAGATGATGGAATTTGCTGAGAAGCTAGGATGGAGGATCCAGAAGAATGATGAGCAGGAACTGCAGCAGTTTTGCGTTGAAGTGGGAGTAAAAAAAAAGGTTTTCAAGGTTTGGATGCACAATAACAAGCAAGCTATGAAGAAGAAGCAAATGTAA 315 0.4381 MMMTFGAKGGGAAAESSSEDLNVFFSDGGRQPLVQPSLSKKRFRTKFTQQQKDKMMEFAEKLGWRIQKNDEQELQQFCVEVGVKKKVFKVWMHNNKQAMKKKQM* 105
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte12g00431 104 NCBIfam homeobox domain, ZF-HD class 40 97 IPR006455 -
Pte12g00431 104 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 19 98 - -
Pte12g00431 104 Gene3D - 30 101 - -
Pte12g00431 104 FunFam Zinc-finger homeodomain protein 2 29 101 - -
Pte12g00431 104 SUPERFAMILY Homeodomain-like 28 101 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte12g00431 Pte-Chr12 3622681 3622995 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte12g00431 1 105 ZF-HD Transcription Factor Family AT2G18350 60.000 4.88e-36 121
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte12g00431 - - cill:122307806 131.724