Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte12g00429 ATGGAACTGACAAACCAAGATAAGGAAATAGGAGCTTCAGCTACTTTGGGTTACAAGCTGTTTACTTCAACTGTAGGTGAAAAAAGAGAGGCAACTGCTCGTTTCCATGAGGTCTTCAACAATACATCCCAAACCCTAGACCAACAACATCTTTATAATCCTTCTCCTCTTTCATCTAAAGAATCAAGTCCACCTCAACAATCTCACAACCCCAGAAGAGATCCAGATCTGGTCACAGTTCCCGTTGCCACCACAAGCTTAGTTACAGCAGCAGCGATCTGTGTGTCAAACTCACGAGCATCAACACGACAGCAGACAGCAGCAGGAACAACATTAATCCCCCGAAACACTACCATTGACTGTATCAAACCCTCAATAAGGTACCGAGAATGTTTGAAAAACCACGCTGCAAGCAGTGGAGGTCATGTGGTAGATGGCTGTGGAGAATTTATGCCAAGTGGAGAAGAAGGCACTCCAGAATCCATAAAATGTGCAGCTTGTCAGTGCCACCGCAACTTTCACAGGAAAGAAATCGAAGGTGAGCCTCAATATGTATCCAGTTGTTGCTATGTCCCCTATAAAAGCGACAACCCCAGAGATGGTCTCCTTTCTCATCGTCCGTCACACAATCTCCTTCCTCAGTTTCCTCCAGCTTCTGAACCTCATCAGCAGCGTCAGAGATTCTTCCATGGTCCTCCACCAATGATGATGACTTTTGGAGCTAAAGGGGGCGGTGCAGCAGCTGAGTCTTCAAGTGAAGATCTCAACATGTTCTTCTCTGATGGTGGAAGGCAACCATTAGTGCAGCCATCCTTATCAAAGAAGCGGTTTAGGACAAAGTTCACGCAGCAGCAAAAGGACAAGATGATGGAATTTGCTGAGAAGATAGGATGGAGGATCCAGAAGAATGATGAGCAGGAACTGCAGCAGTTTTGCGTTGAAGTGGGAGTTAAAAAAAAGGTTTTCAAGGTTTGGATGCACAATAACAAGCAAGCTATGAAGAAGAAGCAAATCGAGAACGGGAAATGA 1029 0.4519 MELTNQDKEIGASATLGYKLFTSTVGEKREATARFHEVFNNTSQTLDQQHLYNPSPLSSKESSPPQQSHNPRRDPDLVTVPVATTSLVTAAAICVSNSRASTRQQTAAGTTLIPRNTTIDCIKPSIRYRECLKNHAASSGGHVVDGCGEFMPSGEEGTPESIKCAACQCHRNFHRKEIEGEPQYVSSCCYVPYKSDNPRDGLLSHRPSHNLLPQFPPASEPHQQRQRFFHGPPPMMMTFGAKGGGAAAESSSEDLNMFFSDGGRQPLVQPSLSKKRFRTKFTQQQKDKMMEFAEKIGWRIQKNDEQELQQFCVEVGVKKKVFKVWMHNNKQAMKKKQIENGK* 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte12g00429 342 Gene3D - 265 335 - -
Pte12g00429 342 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 104 331 - -
Pte12g00429 342 MobiDBLite consensus disorder prediction 43 73 - -
Pte12g00429 342 SUPERFAMILY Homeodomain-like 263 335 IPR009057 -
Pte12g00429 342 Pfam ZF-HD protein dimerisation region 126 178 IPR006456 -
Pte12g00429 342 NCBIfam homeobox domain, ZF-HD class 274 331 IPR006455 -
Pte12g00429 342 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 128 177 IPR006456 -
Pte12g00429 342 MobiDBLite consensus disorder prediction 43 77 - -
Pte12g00429 342 FunFam Zinc-finger homeodomain protein 2 264 335 - -
Pte12g00429 342 NCBIfam ZF-HD homeobox protein Cys/His-rich dimerization domain 127 178 IPR006456 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte12g00429 Pte-Chr12 3603835 3606290 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte12g00429 127 338 ZF-HD Transcription Factor Family AT2G18350 55.300 3.39e-67 210
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Pte12g00429 ZF-HD_dimer 1.2e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte12g00429 - - dzi:111292172 314.309