Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte12g00387 ATGATCAAGTATCAAAAAGGTTTCGCTTGTCTAGTTACAATCTTTATGTTCTATACATCAAGTGCCCAAAGGCCTGAGCTTTCCTGCCAGAGCACTTGTGGAAGTACCACTCTGCAGTACCCATTTGGTTTCTCTGAAGGTTGTGAAATTCAACTCCGCTGCAGCATCAGCAACAGTAGCATCCAAGTTGGTGAATTTGTTGTCCAAAGGGTAACACCCAGTAGCATTTTTGTCAATATTCCCGCAAAATGTGACCGCGGTATTGATTCCATTAGGCATATCTTTGGTTCAAACTATGCACCCACATCAAACAACAGCTTGCTCGTGCAGAATTGTGCAACTATGTCAAGTGGGTGCGTTATTCCCATAAGTCTAGTCAGCAAGAGGTTTGCGATGGAAGGTTGTAATGCCAAGAGCGATAACATAAGTTGCTACTCACAAGAGCAAGTGAATAAAACTGTCGATTTTTTGAGCTACATGGATGTGAATAAGGCTAATTGCAAATGTTTGTTCTCAGCTATTTCTATGGATGACAAGATAACCTCAGGGACAGGGGTGTCCCTGGTATTTCAGATGTTGGAATTGGGTTGGTGGCTCCCTGGTTCGTGTGCGTGTTCATCTAATGCCAAGTGTGCCCGAGTTATATTCAATGAAACTACATCTGGATATAGGTGCCAGTGTCTTGATGGTTTTCACGGTGATGGTTTCTACAATGGTAACGGTTGCCGGAGAGTTTCTAACTGCAATGCTTCGAAATACTTGACTGGCGATTGTGGAGGTAAAGCCAGAGTTGGCCTTCTAATTGTAGGGTTCGTTGCTGGAGCTACCATTGTGGCTGGTCTGTGCATTCTCTGCTATTGTCTGCGGCGCCGTTCTACTTGTTTGAGGAACCAGATGAGTGCAAGGCGCCTTCTGAGTGAAGCTGCCGGGAACACCAGTGTTGCTCTATATCCTTACAAAGATATAGAAAAAGCCACTAATGGCTTCTCTGAGAAACATAGACTTGGAACTGGGGCTTTTGGCACAGTGTATGCAGGAAAGTTCAGCAATGATGATTGGGTAGCAATAAAGAAAATAAAACAGAGAGACACCAATAGCATTGATCTGGTGATGAATGAAATAAAATTACTTTCTTCTGTTAGCCATCCAAATTTGGTTCGTCTCTTGGGTTGCTGCATAGAGGAAGGTGAACAGATTCTTGTCTATGAATTCATGCCTAATGGAACTCTGTCACAGCATCTACAAAGAGAGAGAGGCAAAGGACTGCCATGGACATTTCGGCTGACAATTGCTGCTGAAACTGCTCATGCCATAGCATATCTCCACACTGCAATTAATCCTCCCATTTATCATAGAGATATTAAGTCTAGCAATATTCTCTTGGACTTCAACTTCAAATCGAAGGTTGCAGATTTTGGCCTTTCTAGACTTGGTATGACAGAACTGTCCCACATATCAACGGCTCCACAAGGAACTCCTGGCTATGTTGATCCTCAGTACCATCAGAATTTCCATCTTTCAGATAGGAGCGATGTCTACAGTTTTGGTGTAGTTTTAGTAGAGATTATAAGTGCACTGAAAGTGGTCGATTTTGCACGCCCTCAAAGTGAGATAAATTTGGCTGCACTAGCTATTGATAGGATTGGAAGGGGTTGCATAGATGAGATCATTGATCCTCTCCTAGAGCCTCACAGGGATGCTTGGACGCTATACTCTATCCACAAGGTGGCTGAGCTTGCATTCAGATGCCTTGCTTTTCACAGTGACATGAGGCCTTCTATGGTGGAAGTGGCAGAGGAGCTTGACCACATTAGACGCAGTGGCTGGACGATGGAAGAAACTGTTTGTACGGCATCTTCCCTGGGATCATCATGTTCATCGCCACATAATTTAAGTGAAAAGTCATTCAGTGGTAAGGTCATTAAGAGAGCTGGAGTGGAGAGTCAAAGATTGATTGTTCCACCGAAAATAGATAATTGTCTTGAATCAGTTGAGGAAGTGAAAGAGAACTCCCCTATATCTGTTCAAGAGCTCTGGTCAAGTGCCCACAGCTCACCTTCTACAAGCAGCTTATTGAGTAATGCAGTACAGTAA 2094 0.4355 MIKYQKGFACLVTIFMFYTSSAQRPELSCQSTCGSTTLQYPFGFSEGCEIQLRCSISNSSIQVGEFVVQRVTPSSIFVNIPAKCDRGIDSIRHIFGSNYAPTSNNSLLVQNCATMSSGCVIPISLVSKRFAMEGCNAKSDNISCYSQEQVNKTVDFLSYMDVNKANCKCLFSAISMDDKITSGTGVSLVFQMLELGWWLPGSCACSSNAKCARVIFNETTSGYRCQCLDGFHGDGFYNGNGCRRVSNCNASKYLTGDCGGKARVGLLIVGFVAGATIVAGLCILCYCLRRRSTCLRNQMSARRLLSEAAGNTSVALYPYKDIEKATNGFSEKHRLGTGAFGTVYAGKFSNDDWVAIKKIKQRDTNSIDLVMNEIKLLSSVSHPNLVRLLGCCIEEGEQILVYEFMPNGTLSQHLQRERGKGLPWTFRLTIAAETAHAIAYLHTAINPPIYHRDIKSSNILLDFNFKSKVADFGLSRLGMTELSHISTAPQGTPGYVDPQYHQNFHLSDRSDVYSFGVVLVEIISALKVVDFARPQSEINLAALAIDRIGRGCIDEIIDPLLEPHRDAWTLYSIHKVAELAFRCLAFHSDMRPSMVEVAEELDHIRRSGWTMEETVCTASSLGSSCSSPHNLSEKSFSGKVIKRAGVESQRLIVPPKIDNCLESVEEVKENSPISVQELWSSAHSSPSTSSLLSNAVQ* 698
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte12g00387 697 Gene3D Transferase(Phosphotransferase) domain 1 405 619 - -
Pte12g00387 697 ProSiteProfiles Protein kinase domain profile. 329 606 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte12g00387 697 FunFam Wall-associated receptor kinase-like 14 296 404 - -
Pte12g00387 697 ProSitePatterns Serine/Threonine protein kinases active-site signature. 449 461 IPR008271 GO:0004672|GO:0006468
Pte12g00387 697 ProSitePatterns Protein kinases ATP-binding region signature. 335 358 IPR017441 GO:0005524
Pte12g00387 697 Gene3D Phosphorylase Kinase; domain 1 290 404 - -
Pte12g00387 697 FunFam Wall-associated receptor kinase-like 20 405 614 - -
Pte12g00387 697 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 11 680 IPR044652 GO:0004672
Pte12g00387 697 Pfam Protein tyrosine and serine/threonine kinase 332 601 IPR001245 GO:0004672|GO:0006468
Pte12g00387 697 SUPERFAMILY Protein kinase-like (PK-like) 310 601 IPR011009 -
Pte12g00387 697 SMART serkin_6 329 610 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte12g00387 697 Gene3D Laminin 203 238 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte12g00387 Pte-Chr12 3229114 3234180 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte12g00387 27 694 Receptor kinase-like Gene Family AT2G23450 56.444 0.0 759
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Pte12g00387 PK_Tyr_Ser-Thr 6.5e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte12g00387 - - qsa:O6P43_024659 1001.12