Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte12g00377 ATGGCATTCTCGTTATTCTCAACTCCACAAACACAGCAGCAGCAATCCTTGTTTCAGACACCACAGCAGCAGCAGCAGCTATTTCAGACACCACAACAGCAGCAGACACAACAACAAACTGGTTTCTTGTTTCCACAGCAACAGCAACAGCAACAGCAGCAGCAGCAGCAGCAGCAGCAGCAGTTCTTTCAACAGCAGCCGCAGCACCAACAGCAGCAGCTGCAATTGTACTTATTCACTAAAGATAAAGCCGCTGCCAATTACAGCACAAAGTGGGCAGATCTCCATCCAGATTCTCAGAAACTCCTCCTTCAAATCGAAGAGCGGATATTGGAGTACAGGGACGAGAGTCAGAGGCTTGATCAGTGTAGTCGTCTTTATGATTCGTCGGGTTTAAATGATGGGTTTGAGCTGGATGCAAGCCACATTGTTCAGGAGCTTGGTGGAATTAGTACTTCTTTGGAACGCCAGAAAGCTTTACTGCAGGAGTTGATGTCAAATGTCAAGGATATGTTACGCAATACCGAGGTTGCTGTTCGATCCTTTATGATGCTACGTCCACGGTTCCTCCATCCACAAGTGGGGAGTGGTTCAAGTGCCACAGGACCATCTCAAACTCCTGGAGCAACATTACAATCTGGTTCAAGTGCTCAACCTTCAACAGCTTCAATAGTCCCAATCTTTGATTTCTATAATGGGCTGCCAAAGAAGCCTTCTCCCTTTTTACAGAAAACGGTTATTAGATTTGAGAAATATCTTACTGAGTGCCGCCAATGGATTGAGGAGTTGGAGCAGTTGCTTCTCTTAGATTCTGATAGAAATGCTTCGAATGGTGGATCCTCACTATTGCATTCTCTTCCAAAAGTTATGTCAAATTTGCACGACTTCTTTATTCATGTTGCTGCAAAGGTGGAAAGCATTCATCAGTTCATTGAATCTATGAAAACAGCTTACCTTATTGACCAGCGTCGTCGTGGAGATGTGAATGATCCATTTCTTGAAGCTGATCGGCGTGAAACAGCAAGACAAGAAGCTGCAGCCAAAAGGGTTCATCCAACTTTGCATTTACCTGCTAATTCGCAACCTCTGACTCAAGTTGCTGGTTTGTTTTCCAGCTCAGGAGCTAATGCTGCTGCAAATACCCCACAGATATCTGCAGCTGCAACATCGTCATCTGGCAGTGGCTTTTCACTTCTTAATACACCTTCTGCTCCCTTTGCATCCATGTCATCTTTGTTTACCACGCCCAGCACATCTGCTCAAGTACCTTCTCTGTTTCCATCATCTAGTGCGACACCTCAAACTTCTAATTTGGGAGCTTCGTCAGCATTGCTTTTTGGTTCTACTTCAACTTCATCTCTGTTTAGTACTGGGCCGTCTTTTACTTCAAATCCATTTGCCGCAGCGACAGGATCAGGAGCTAGCTTTGGGGCATCAAAATCATCGAGGCCAAAAACTCGAACTGCTAGGCGCTAG 1476 0.4533 MAFSLFSTPQTQQQQSLFQTPQQQQQLFQTPQQQQTQQQTGFLFPQQQQQQQQQQQQQQQQFFQQQPQHQQQQLQLYLFTKDKAAANYSTKWADLHPDSQKLLLQIEERILEYRDESQRLDQCSRLYDSSGLNDGFELDASHIVQELGGISTSLERQKALLQELMSNVKDMLRNTEVAVRSFMMLRPRFLHPQVGSGSSATGPSQTPGATLQSGSSAQPSTASIVPIFDFYNGLPKKPSPFLQKTVIRFEKYLTECRQWIEELEQLLLLDSDRNASNGGSSLLHSLPKVMSNLHDFFIHVAAKVESIHQFIESMKTAYLIDQRRRGDVNDPFLEADRRETARQEAAAKRVHPTLHLPANSQPLTQVAGLFSSSGANAAANTPQISAAATSSSGSGFSLLNTPSAPFASMSSLFTTPSTSAQVPSLFPSSSATPQTSNLGASSALLFGSTSTSSLFSTGPSFTSNPFAAATGSGASFGASKSSRPKTRTARR* 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte12g00377 491 Gene3D - 237 327 - -
Pte12g00377 491 MobiDBLite consensus disorder prediction 469 483 - -
Pte12g00377 491 PANTHER NUCLEOPORIN P58/P45 NUCLEOPORIN-LIKE PROTEIN 1 7 460 IPR024882 GO:0005643|GO:0006913|GO:0008139|GO:0017056
Pte12g00377 491 MobiDBLite consensus disorder prediction 193 218 - -
Pte12g00377 491 Coils Coil 154 174 - -
Pte12g00377 491 MobiDBLite consensus disorder prediction 194 218 - -
Pte12g00377 491 MobiDBLite consensus disorder prediction 469 491 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte12g00377 76 492 NAC Transcription Factor Family AT4G37130 64.720 2.19e-180 514
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte12g00377 K14307 - mnt:21403185 572.007
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte12g00377 12 3132090 3135723 Pte12g00377 12 3132090 3135723 RCT