Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte12g00368 ATGGAGTTGAGTTTGGATTTGAGTTTGACATATGTCCCACGGACCCTATCTGAGTTGCTTGGTGATCTCTCCAGAACTACAGATGGGGCAGAGAGGTCATCCGCGCTTGAGGATTTTCTCAAAAGATTGGAAGAGGAGATGAGAAAGATTGAAGCTTTTAAACGTGAGCTTCCTCTTTGCATGCATTTGATGAAAGATGCTATAGTGAGGTTGAAGGAACAGAAAGTGCAGTACATGGAAGTGCAAGATCAATCTGTAGTTGAAAAATTCAATCTTCTGAAGAAGCATAGTGGAGAAGAAGGTGCTGCTGATAACAGCAACGATAAGAAAAGTTGGATGAGTTCAGCTCAATTATGGAGCACTGATACTAGATCGACGATTGGACAAGATGACCGCTCTGTGCCGGAGAACCCAATCCACTCATGGAGTAAGAAAAACAGGGGAGGAGCATTTGTTCCATTTAATGGTGTAAATTCTGAGATCTCATTTTCAAAAACATTCGTGAAGGATTCCAAAGAAGTTTCACAAGTTCCAAGTCTTTCTCTCATGACTCCAATTTCAAAACTTAGTTCCAGTCACATGCAGAACAACAGCAAAGGAAGTTCTAGGACATCTATGTTGCCTGAGCCAATTAAAACACATGGCCAAGCACAAGGTCAGCACCAGCAGGCCTCAAGGAAACAAAGGCGATGCTGGTCTCCTGAGTTGCATAGACGCTTCATTGATGCGCTTCAACAGTTGGGAGGTCCACAAGTGGCCACTCCAAAACAAGTCAGAGAACTCATGCATGTTGATGGCCTAACAAACGATGAAGTAAAAAGCCATTTGCAAAAGTACAGGCTTCATGTTAGAAGAGTCCCACCCTCTTCAGTTCCCCACGCAAATGGTCTGCAGATGAGCCAAGATCAATCTGCAGAGACATCGAAGACAACCTTATCACAATCTGGCTCTCCACAAGGTCCTCTCATTTTAGGAACCTCAGTTAGAGGACCCTCAAGTACCGGAGGTAACAGCTTGGATGGTGAAGAGGATGAGAATTCAGACGGATATAGTTGGAAAGGTGGGCTTCACCAACAAGGAGAAGTTGATGTACAATCCTAA 1101 0.4396 MELSLDLSLTYVPRTLSELLGDLSRTTDGAERSSALEDFLKRLEEEMRKIEAFKRELPLCMHLMKDAIVRLKEQKVQYMEVQDQSVVEKFNLLKKHSGEEGAADNSNDKKSWMSSAQLWSTDTRSTIGQDDRSVPENPIHSWSKKNRGGAFVPFNGVNSEISFSKTFVKDSKEVSQVPSLSLMTPISKLSSSHMQNNSKGSSRTSMLPEPIKTHGQAQGQHQQASRKQRRCWSPELHRRFIDALQQLGGPQVATPKQVRELMHVDGLTNDEVKSHLQKYRLHVRRVPPSSVPHANGLQMSQDQSAETSKTTLSQSGSPQGPLILGTSVRGPSSTGGNSLDGEEDENSDGYSWKGGLHQQGEVDVQS* 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte12g00368 366 MobiDBLite consensus disorder prediction 189 227 - -
Pte12g00368 366 Pfam Myb-like DNA-binding domain 229 280 IPR001005 -
Pte12g00368 366 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 224 284 IPR017930 -
Pte12g00368 366 MobiDBLite consensus disorder prediction 287 366 - -
Pte12g00368 366 Coils Coil 36 56 - -
Pte12g00368 366 Coils Coil 64 84 - -
Pte12g00368 366 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 8 353 IPR044787 GO:0003700|GO:0006355
Pte12g00368 366 Gene3D - 226 283 - -
Pte12g00368 366 NCBIfam myb-like DNA-binding domain, SHAQKYF class 227 282 IPR006447 GO:0003677
Pte12g00368 366 SUPERFAMILY Homeodomain-like 225 285 IPR009057 -
Pte12g00368 366 MobiDBLite consensus disorder prediction 121 141 - -
Pte12g00368 366 MobiDBLite consensus disorder prediction 293 340 - -
Pte12g00368 366 FunFam Myb family transcription factor 226 284 - -
Pte12g00368 366 MobiDBLite consensus disorder prediction 189 231 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte12g00368 Pte-Chr12 3051618 3055066 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte12g00368 1 296 G2-like Transcription Factor Family AT2G03500 40.000 2.21e-59 196
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Pte12g00368 Myb_DNA-binding 2.3e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte12g00368 - - qsa:O6P43_024686 421.779
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte12g00368 12 3051618 3055066 Pte12g00368 12 3051618 3055066 RCT