Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte12g00342 ATGGAGTGGGTTCGGGGAGACACAGTTGGGTGTGGAAGTTTCGCAACTGTTAGTTTAGTAATACCAAGAATATGTGACACTCAATTTCCACCACTTACAGTGGTGAAATCTTGTGAAGCCTCATGCTCTGATACGCTCAAGAACGAAAAGCAAGTGCTTGATCGTATGGGTAACTGCCCGCAAATTATTAAGTGTTTTGGAGAAAGTTACAGCTCTGAAGATGGTGAGGAATTGTATAACCTCTTTCTAGAATACGCGACCGGTGGCAGTTTAGCAGATCAGGTGAAGGGCTGTGGTGGGAAGTTGCCTGAATCGGATGTCAGGAGATACACGAGGTCGATACTCAAAGGGCTTCATCATATTCACACCCAAGGTTTCGTGCACTGTGATATTAAGCTTCAGAATGTTCTTGTGTTTGATCATGGCGATGTTAAGATATCGGATTTCGGGCTGGCTAAGAATTCAAATGAAAAACAGAGCACCAAAATCGAGCTCAGAGGTACTCCTCTGTATATGTCACCGAAATCAGTCAACGACAACAAATACGATCCTTCATCTGATATCTGA 567 0.4356 MEWVRGDTVGCGSFATVSLVIPRICDTQFPPLTVVKSCEASCSDTLKNEKQVLDRMGNCPQIIKCFGESYSSEDGEELYNLFLEYATGGSLADQVKGCGGKLPESDVRRYTRSILKGLHHIHTQGFVHCDIKLQNVLVFDHGDVKISDFGLAKNSNEKQSTKIELRGTPLYMSPKSVNDNKYDPSSDI* 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte12g00342 188 ProSitePatterns Protein kinases ATP-binding region signature. 9 36 IPR017441 GO:0005524
Pte12g00342 188 MobiDBLite consensus disorder prediction 173 188 - -
Pte12g00342 188 MobiDBLite consensus disorder prediction 158 188 - -
Pte12g00342 188 SMART serkin_6 3 188 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte12g00342 188 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 3 188 - -
Pte12g00342 188 ProSitePatterns Serine/Threonine protein kinases active-site signature. 126 138 IPR008271 GO:0004672|GO:0006468
Pte12g00342 188 Gene3D Transferase(Phosphotransferase) domain 1 92 188 - -
Pte12g00342 188 Pfam Protein kinase domain 5 188 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte12g00342 188 ProSiteProfiles Protein kinase domain profile. 3 188 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte12g00342 188 Gene3D Phosphorylase Kinase; domain 1 1 91 - -
Pte12g00342 188 SUPERFAMILY Protein kinase-like (PK-like) 3 188 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte12g00342 Pte-Chr12 2825285 2825851 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte12g00342 1 188 MAP Kinase Kinase Kinase AT4G36950 57.672 1.39e-74 226
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Pte12g00342 Pkinase 2.9e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte12g00342 - - qsa:O6P43_033828 270.011
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte12g00342 12 2825285 2825851 Pte12g00342 12 2825285 2825851 RCT